SLC6A18 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of SLC6A18 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	96%	106.39	85 / 89	51%	13.83	461 / 901
intestine	39%	3.54	375 / 966	2%	0.03	8 / 527
stomach	25%	0.52	89 / 359	3%	0.16	10 / 286
prostate	23%	0.78	57 / 245	0%	0.12	2 / 502
brain	20%	0.30	539 / 2642	3%	0.06	21 / 705
spleen	18%	0.27	44 / 241	0%	0	0 / 0
lung	16%	0.22	93 / 578	2%	0.04	21 / 1155
pancreas	17%	0.34	55 / 328	1%	0.33	2 / 178
liver	14%	0.16	32 / 226	1%	0.03	6 / 406
bladder	14%	0.24	3 / 21	1%	0.01	6 / 504
uterus	13%	0.16	22 / 170	0%	0	0 / 459
esophagus	11%	0.15	156 / 1445	2%	0.06	3 / 183
peripheral blood	12%	0.15	110 / 929	0%	0	0 / 0
thymus	11%	0.15	72 / 653	0%	0	0 / 605
skin	10%	0.14	182 / 1809	0%	0.03	1 / 472
heart	10%	0.13	88 / 861	0%	0	0 / 0
adrenal gland	9%	0.13	24 / 258	0%	0	0 / 230
muscle	9%	0.11	69 / 803	0%	0	0 / 0
ovary	8%	0.13	15 / 180	0%	0	0 / 430
adipose	8%	0.12	98 / 1204	0%	0	0 / 0
blood vessel	8%	0.10	107 / 1335	0%	0	0 / 0
breast	7%	0.08	33 / 459	0%	0.00	1 / 1118
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006865	Biological process	amino acid transport
GO_0015804	Biological process	neutral amino acid transport
GO_1990297	Biological process	renal amino acid absorption
GO_0035725	Biological process	sodium ion transmembrane transport
GO_0071705	Biological process	nitrogen compound transport
GO_0003333	Biological process	amino acid transmembrane transport
GO_0006836	Biological process	neurotransmitter transport
GO_0031526	Cellular component	brush border membrane
GO_0016324	Cellular component	apical plasma membrane
GO_0005886	Cellular component	plasma membrane
GO_0015171	Molecular function	amino acid transmembrane transporter activity
GO_0140931	Molecular function	neutral L-amino acid:sodium:chloride symporter activity

Gene name	SLC6A18
Protein name	Inactive sodium-dependent neutral amino acid transporter B(0)AT3 (Sodium- and chloride-dependent transporter XTRP2) (Solute carrier family 6 member 18) (System B(0) neutral amino acid transporter AT3) Transporter
Synonyms	hCG_1991125 B0AT3 XTRP2
Description	FUNCTION: Does not show neutral amino acid transporter activity. .
Accessions	Q96N87 ENST00000324642.4 Q9BYZ7

SLC6A18 report