Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 3 studies | 30% ± 12% |
Insufficient scRNA-seq data for expression of SLC6A16 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 99% | 632.42 | 224 / 226 | 83% | 3.03 | 339 / 406 |
kidney | 100% | 572.46 | 89 / 89 | 74% | 3.34 | 670 / 901 |
prostate | 100% | 650.74 | 245 / 245 | 71% | 1.57 | 354 / 502 |
lung | 100% | 588.01 | 576 / 578 | 64% | 1.67 | 743 / 1155 |
pancreas | 100% | 465.48 | 328 / 328 | 59% | 1.42 | 105 / 178 |
breast | 100% | 425.53 | 458 / 459 | 54% | 1.56 | 606 / 1118 |
ovary | 100% | 786.32 | 180 / 180 | 52% | 1.45 | 223 / 430 |
skin | 70% | 192.87 | 1272 / 1809 | 80% | 3.01 | 379 / 472 |
uterus | 100% | 624.97 | 170 / 170 | 51% | 1.84 | 232 / 459 |
esophagus | 92% | 394.19 | 1332 / 1445 | 43% | 1.04 | 78 / 183 |
thymus | 99% | 432.38 | 648 / 653 | 35% | 0.72 | 212 / 605 |
bladder | 100% | 449.14 | 21 / 21 | 29% | 1.04 | 146 / 504 |
stomach | 100% | 350.00 | 358 / 359 | 26% | 0.55 | 74 / 286 |
adrenal gland | 94% | 209.49 | 243 / 258 | 20% | 0.53 | 46 / 230 |
intestine | 95% | 391.25 | 920 / 966 | 15% | 0.38 | 78 / 527 |
spleen | 100% | 466.26 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 519.66 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 874.77 | 1331 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.96 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 91% | 2.88 | 73 / 80 |
brain | 41% | 65.58 | 1082 / 2642 | 41% | 0.93 | 287 / 705 |
heart | 76% | 154.27 | 657 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 75% | 135.75 | 699 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 60% | 1.49 | 27 / 45 |
muscle | 30% | 42.40 | 242 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006865 | Biological process | amino acid transport |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_0006836 | Biological process | neurotransmitter transport |
GO_0005886 | Cellular component | plasma membrane |
GO_0015293 | Molecular function | symporter activity |
GO_0005326 | Molecular function | neurotransmitter transmembrane transporter activity |
Gene name | SLC6A16 |
Protein name | Solute carrier family 6 member 16 Orphan sodium- and chloride-dependent neurotransmitter transporter NTT5 (Solute carrier family 6 member 16) |
Synonyms | NTT5 |
Description | |
Accessions | ENST00000454748.7 [Q9GZN6-2] Q9GZN6 ENST00000598828.1 M0QYK3 ENST00000335875.9 [Q9GZN6-1] ENST00000594180.1 M0R1Y6 M0QZL4 M0R2R5 ENST00000597969.5 ENST00000594917.1 |