Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell of proximal tubule | 8 studies | 40% ± 22% | |
enterocyte | 6 studies | 28% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney | 4 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 14793.27 | 89 / 89 | 60% | 28.50 | 542 / 901 |
brain | 88% | 94.71 | 2333 / 2642 | 10% | 0.14 | 72 / 705 |
intestine | 85% | 1115.49 | 824 / 966 | 8% | 0.22 | 40 / 527 |
spleen | 90% | 71.05 | 218 / 241 | 0% | 0 | 0 / 0 |
esophagus | 29% | 6.35 | 424 / 1445 | 58% | 1.99 | 107 / 183 |
bladder | 62% | 29.81 | 13 / 21 | 26% | 0.63 | 129 / 504 |
liver | 66% | 90.43 | 150 / 226 | 11% | 0.55 | 46 / 406 |
lung | 27% | 5.30 | 155 / 578 | 32% | 0.97 | 373 / 1155 |
adipose | 56% | 15.41 | 672 / 1204 | 0% | 0 | 0 / 0 |
heart | 54% | 513.40 | 467 / 861 | 0% | 0 | 0 / 0 |
ovary | 25% | 4.38 | 45 / 180 | 23% | 0.69 | 99 / 430 |
breast | 40% | 7.88 | 182 / 459 | 6% | 0.22 | 70 / 1118 |
uterus | 34% | 7.17 | 57 / 170 | 12% | 0.31 | 54 / 459 |
blood vessel | 45% | 13.76 | 598 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 43% | 8.06 | 111 / 258 | 0% | 0.01 | 1 / 230 |
thymus | 29% | 5.66 | 187 / 653 | 8% | 0.39 | 49 / 605 |
skin | 26% | 4.87 | 465 / 1809 | 11% | 0.62 | 52 / 472 |
prostate | 35% | 7.60 | 85 / 245 | 1% | 0.01 | 3 / 502 |
stomach | 22% | 5.94 | 80 / 359 | 12% | 0.31 | 35 / 286 |
pancreas | 2% | 0.16 | 5 / 328 | 9% | 0.27 | 16 / 178 |
muscle | 8% | 1.50 | 68 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.11 | 3 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.11 | 1 / 29 |
peripheral blood | 1% | 0.12 | 8 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0015718 | Biological process | monocarboxylic acid transport |
GO_0006814 | Biological process | sodium ion transport |
GO_0035873 | Biological process | lactate transmembrane transport |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005886 | Cellular component | plasma membrane |
GO_0005343 | Molecular function | organic acid:sodium symporter activity |
GO_0015293 | Molecular function | symporter activity |
GO_0015129 | Molecular function | lactate transmembrane transporter activity |
GO_0140161 | Molecular function | monocarboxylate:sodium symporter activity |
Gene name | SLC5A12 |
Protein name | Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12) SLC5A12 protein (Solute carrier family 5 (Sodium/glucose cotransporter), member 12, isoform CRA_c) Solute carrier family 5 (Sodium/glucose cotransporter), member 12, isoform CRA_b (Solute carrier family 5 member 12) Solute carrier family 5 member 12 |
Synonyms | hCG_2036627 SMCT2 |
Description | FUNCTION: Acts as an electroneutral and low-affinity sodium (Na(+))-dependent sodium-coupled solute transporter . Catalyzes the transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, nicotinate, propionate, butyrate and beta-D-hydroxybutyrate (By similarity). May be responsible for the first step of reabsorption of monocarboxylates from the lumen of the proximal tubule of the kidney and the small intestine. May play also a role in monocarboxylates transport in the retina (By similarity). . |
Accessions | E9PLZ7 G3V1E3 Q1EHB4 ENST00000396005.8 [Q1EHB4-1] ENST00000280467.10 [Q1EHB4-2] ENST00000527405.5 Q8IUS7 ENST00000533617.5 |