Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 8 studies | 36% ± 18% | |
enterocyte | 6 studies | 39% ± 6% | |
epithelial cell of proximal tubule | 4 studies | 23% ± 11% | |
ciliated cell | 4 studies | 29% ± 5% | |
dendritic cell | 3 studies | 20% ± 1% | |
plasmacytoid dendritic cell | 3 studies | 19% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 4 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 895.63 | 180 / 180 | 99% | 71.07 | 426 / 430 |
stomach | 100% | 927.42 | 359 / 359 | 97% | 68.14 | 278 / 286 |
intestine | 100% | 4071.79 | 964 / 966 | 97% | 70.62 | 513 / 527 |
bladder | 100% | 416.00 | 21 / 21 | 96% | 42.44 | 483 / 504 |
esophagus | 98% | 413.47 | 1422 / 1445 | 97% | 31.34 | 177 / 183 |
lung | 100% | 876.99 | 577 / 578 | 94% | 32.38 | 1084 / 1155 |
pancreas | 99% | 408.80 | 326 / 328 | 92% | 39.96 | 164 / 178 |
uterus | 99% | 339.15 | 168 / 170 | 87% | 24.58 | 400 / 459 |
thymus | 100% | 1212.14 | 652 / 653 | 85% | 14.93 | 516 / 605 |
skin | 99% | 625.58 | 1792 / 1809 | 82% | 16.61 | 389 / 472 |
breast | 98% | 435.39 | 452 / 459 | 77% | 16.31 | 866 / 1118 |
prostate | 99% | 583.48 | 243 / 245 | 76% | 12.52 | 380 / 502 |
kidney | 100% | 2768.61 | 89 / 89 | 56% | 13.13 | 509 / 901 |
liver | 96% | 282.52 | 217 / 226 | 39% | 11.50 | 158 / 406 |
adrenal gland | 99% | 446.47 | 256 / 258 | 35% | 4.48 | 80 / 230 |
ureter | 0% | 0 | 0 / 0 | 100% | 78.99 | 1 / 1 |
spleen | 100% | 474.60 | 240 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 29.50 | 77 / 80 |
adipose | 96% | 273.94 | 1158 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 16.09 | 42 / 45 |
peripheral blood | 91% | 343.58 | 848 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 14.79 | 26 / 29 |
blood vessel | 90% | 233.00 | 1195 / 1335 | 0% | 0 | 0 / 0 |
heart | 80% | 185.24 | 688 / 861 | 0% | 0 | 0 / 0 |
brain | 72% | 244.11 | 1909 / 2642 | 7% | 0.71 | 50 / 705 |
muscle | 66% | 135.20 | 530 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030003 | Biological process | intracellular monoatomic cation homeostasis |
GO_0071578 | Biological process | zinc ion import across plasma membrane |
GO_0034224 | Biological process | cellular response to zinc ion starvation |
GO_0015701 | Biological process | bicarbonate transport |
GO_0071577 | Biological process | zinc ion transmembrane transport |
GO_0006882 | Biological process | intracellular zinc ion homeostasis |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0106219 | Molecular function | zinc ion sensor activity |
GO_0140486 | Molecular function | zinc ion sequestering activity |
GO_0005385 | Molecular function | zinc ion transmembrane transporter activity |
GO_0140410 | Molecular function | monoatomic cation:bicarbonate symporter activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | SLC39A4 |
Protein name | Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) Solute carrier family 39 member 4 Zinc transporter ZIP4 (Solute carrier family 39 member 4) (Zrt- and Irt-like protein 4) (ZIP-4) |
Synonyms | ZIP4 |
Description | FUNCTION: Selective transporter that mediates the uptake of Zn(2+) . Plays an essential role for dietary zinc uptake from small intestine (By similarity). The Zn(2+) uniporter activity is regulated by zinc availability . Exhibits also polyspecific binding and transport of Cu(2+), Cd(2+) and possibly Ni(2+) but at higher concentrations . . |
Accessions | ENST00000526658.1 E9PQ16 ENST00000301305.8 [Q6P5W5-1] Q6P5W5 ENST00000276833.9 [Q6P5W5-2] A0A0S2Z5G2 A0A0S2Z5G8 |