Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 29% ± 9% | |
endothelial cell | 5 studies | 20% ± 3% | |
oligodendrocyte | 5 studies | 26% ± 6% | |
pericyte | 4 studies | 21% ± 3% | |
ciliated cell | 3 studies | 27% ± 9% | |
astrocyte | 3 studies | 22% ± 6% | |
glutamatergic neuron | 3 studies | 31% ± 10% | |
oligodendrocyte precursor cell | 3 studies | 22% ± 5% | |
goblet cell | 3 studies | 20% ± 2% | |
basal cell | 3 studies | 26% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 29% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1091.13 | 1445 / 1445 | 100% | 20.07 | 183 / 183 |
lung | 100% | 1281.11 | 578 / 578 | 100% | 22.98 | 1155 / 1155 |
ovary | 100% | 911.42 | 180 / 180 | 100% | 20.17 | 430 / 430 |
pancreas | 100% | 1123.12 | 328 / 328 | 100% | 23.53 | 178 / 178 |
stomach | 100% | 1173.80 | 359 / 359 | 100% | 24.23 | 286 / 286 |
breast | 100% | 1352.45 | 459 / 459 | 100% | 28.98 | 1117 / 1118 |
intestine | 100% | 1663.78 | 966 / 966 | 100% | 26.08 | 526 / 527 |
bladder | 100% | 1338.29 | 21 / 21 | 100% | 22.84 | 503 / 504 |
brain | 100% | 832.78 | 2637 / 2642 | 100% | 13.49 | 704 / 705 |
prostate | 100% | 1430.44 | 245 / 245 | 100% | 22.64 | 500 / 502 |
uterus | 100% | 1194.30 | 170 / 170 | 100% | 21.36 | 457 / 459 |
thymus | 100% | 1800.57 | 653 / 653 | 99% | 22.33 | 600 / 605 |
liver | 100% | 974.04 | 226 / 226 | 99% | 19.64 | 402 / 406 |
kidney | 100% | 1261.96 | 89 / 89 | 99% | 20.90 | 892 / 901 |
skin | 100% | 1380.08 | 1806 / 1809 | 98% | 25.03 | 461 / 472 |
adrenal gland | 100% | 1057.10 | 257 / 258 | 97% | 18.96 | 222 / 230 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.63 | 29 / 29 |
spleen | 100% | 1484.47 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.47 | 1 / 1 |
blood vessel | 100% | 1143.50 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1278.01 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 719.00 | 851 / 861 | 0% | 0 | 0 / 0 |
muscle | 94% | 400.83 | 753 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 21.14 | 75 / 80 |
peripheral blood | 69% | 600.57 | 645 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0046963 | Biological process | 3'-phosphoadenosine 5'-phosphosulfate transport |
GO_1902559 | Biological process | 3'-phospho-5'-adenylyl sulfate transmembrane transport |
GO_1902558 | Biological process | 5'-adenylyl sulfate transmembrane transport |
GO_0055085 | Biological process | transmembrane transport |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0046964 | Molecular function | 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity |
GO_0015297 | Molecular function | antiporter activity |
Gene name | SLC35B3 |
Protein name | Adenosine 3'-phospho 5'-phosphosulfate transporter 2 Adenosine 3'-phospho 5'-phosphosulfate transporter 2 (3'-phosphoadenosine 5'-phosphosulfate transporter) (PAPS transporter 2) (Solute carrier family 35 member B3) |
Synonyms | C6orf196 CGI-19 PAPST2 hCG_14673 |
Description | FUNCTION: Probably functions as a 3'-phosphoadenylyl sulfate:adenosine 3',5'-bisphosphate antiporter at the Golgi membranes. Mediates the transport from the cytosol into the lumen of the Golgi of 3'-phosphoadenylyl sulfate/adenosine 3'-phospho 5'-phosphosulfate (PAPS), a universal sulfuryl donor for sulfation events that take place in that compartment. . |
Accessions | ENST00000648867.1 [Q9H1N7-3] ENST00000710437.1 ENST00000648987.1 ENST00000379660.4 [Q9H1N7-1] ENST00000644923.2 [Q9H1N7-1] ENST00000649788.1 Q9H1N7 A0A3B3IRN3 A0A024QZW4 |