Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal ganglion cell | 6 studies | 64% ± 23% | |
glutamatergic neuron | 4 studies | 38% ± 14% |
Insufficient scRNA-seq data for expression of SLC17A6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 45% | 458.47 | 1190 / 2642 | 43% | 2.05 | 303 / 705 |
pancreas | 2% | 2.08 | 7 / 328 | 12% | 0.27 | 22 / 178 |
skin | 0% | 0.42 | 4 / 1809 | 3% | 1.73 | 12 / 472 |
uterus | 0% | 0 | 0 / 170 | 2% | 0.06 | 9 / 459 |
adrenal gland | 0% | 1.86 | 1 / 258 | 1% | 0.24 | 2 / 230 |
eye | 0% | 0 | 0 / 0 | 1% | 0.11 | 1 / 80 |
ovary | 0% | 0 | 0 / 180 | 1% | 0.09 | 5 / 430 |
stomach | 0% | 0.23 | 1 / 359 | 1% | 0.01 | 2 / 286 |
intestine | 0% | 0 | 0 / 966 | 1% | 0.02 | 5 / 527 |
lung | 0% | 0.18 | 1 / 578 | 0% | 0.01 | 3 / 1155 |
bladder | 0% | 0 | 0 / 21 | 0% | 0.02 | 2 / 504 |
breast | 0% | 0 | 0 / 459 | 0% | 0.01 | 4 / 1118 |
prostate | 0% | 0 | 0 / 245 | 0% | 0.00 | 1 / 502 |
adipose | 0% | 0.18 | 1 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
esophagus | 0% | 0 | 0 / 1445 | 0% | 0 | 0 / 183 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 0% | 0 | 0 / 901 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 0% | 0 | 0 / 605 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0055062 | Biological process | phosphate ion homeostasis |
GO_0015813 | Biological process | L-glutamate transmembrane transport |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0071805 | Biological process | potassium ion transmembrane transport |
GO_0044341 | Biological process | sodium-dependent phosphate transport |
GO_0006820 | Biological process | monoatomic anion transport |
GO_1902476 | Biological process | chloride transmembrane transport |
GO_0051938 | Biological process | L-glutamate import |
GO_0006817 | Biological process | phosphate ion transport |
GO_0098700 | Biological process | neurotransmitter loading into synaptic vesicle |
GO_1990384 | Biological process | hyaloid vascular plexus regression |
GO_0050803 | Biological process | regulation of synapse structure or activity |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0035249 | Biological process | synaptic transmission, glutamatergic |
GO_0005886 | Cellular component | plasma membrane |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0043005 | Cellular component | neuron projection |
GO_0034707 | Cellular component | chloride channel complex |
GO_0060076 | Cellular component | excitatory synapse |
GO_0005436 | Molecular function | sodium:phosphate symporter activity |
GO_0005326 | Molecular function | neurotransmitter transmembrane transporter activity |
GO_0015386 | Molecular function | potassium:proton antiporter activity |
GO_0140788 | Molecular function | L-glutamate uniporter activity |
GO_0005313 | Molecular function | L-glutamate transmembrane transporter activity |
GO_0005254 | Molecular function | chloride channel activity |
Gene name | SLC17A6 |
Protein name | Vesicular glutamate transporter 2 (VGluT2) (Differentiation-associated BNPI) (Differentiation-associated Na(+)-dependent inorganic phosphate cotransporter) (Solute carrier family 17 member 6) Alternative protein SLC17A6 |
Synonyms | VGLUT2 DNPI |
Description | FUNCTION: Multifunctional transporter that transports L-glutamate as well as multiple ions such as chloride, proton, potassium, sodium and phosphate . At the synaptic vesicle membrane, mainly functions as a uniporter which transports preferentially L-glutamate but also, phosphate from the cytoplasm into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells . The L-glutamate or phosphate uniporter activity is electrogenic and is driven by the proton electrochemical gradient, mainly by the electrical gradient established by the vacuolar H(+)-ATPase across the synaptic vesicle membrane . In addition, functions as a chloride channel that allows the chloride permeation through the synaptic vesicle membrane therefore affects the proton electrochemical gradient and promotes synaptic vesicles acidification (By similarity). Moreover, functions as a vesicular K(+)/H(+) antiport allowing to maintain the electrical gradient and to decrease chemical gradient and therefore sustain vesicular glutamate uptake (By similarity). The vesicular H(+)/H(+) antiport activity is electroneutral (By similarity). At the plasma membrane, following exocytosis, functions as a symporter of Na(+) and phosphate from the extracellular space to the cytoplasm allowing synaptic phosphate homeostasis regulation (Probable) . The symporter activity is driven by an inside negative membrane potential and is electrogenic (Probable). Also involved in the regulation of retinal hyaloid vessel regression during postnatal development (By similarity). May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas (By similarity). . |
Accessions | Q9P2U8 ENST00000263160.4 L0R6P3 L8ECI6 |