SHISA8 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retina horizontal cell	6 studies	45% ± 19%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	883.83	258 / 258	36%	6.34	82 / 230
brain	82%	872.00	2168 / 2642	46%	1.53	321 / 705
spleen	99%	182.42	239 / 241	0%	0	0 / 0
lymph node	0%	0	0 / 0	86%	16.47	25 / 29
heart	79%	51.46	676 / 861	0%	0	0 / 0
prostate	16%	5.91	39 / 245	50%	1.82	249 / 502
kidney	47%	19.88	42 / 89	3%	0.11	27 / 901
peripheral blood	48%	96.52	445 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	47%	2.17	21 / 45
skin	36%	13.70	657 / 1809	7%	0.22	35 / 472
uterus	6%	2.88	11 / 170	32%	1.20	146 / 459
ovary	5%	2.64	9 / 180	31%	1.07	132 / 430
esophagus	7%	2.74	96 / 1445	23%	0.61	42 / 183
intestine	20%	27.61	192 / 966	7%	0.34	37 / 527
lung	9%	3.58	54 / 578	16%	0.47	183 / 1155
stomach	8%	2.31	27 / 359	17%	1.21	49 / 286
breast	4%	2.72	17 / 459	13%	0.33	142 / 1118
bladder	5%	0.86	1 / 21	8%	0.94	40 / 504
thymus	8%	10.24	53 / 653	4%	0.32	27 / 605
pancreas	0%	0.09	1 / 328	11%	0.39	19 / 178
liver	0%	0.08	1 / 226	3%	0.12	12 / 406
eye	0%	0	0 / 0	3%	0.06	2 / 80
blood vessel	2%	1.48	32 / 1335	0%	0	0 / 0
adipose	2%	1.02	28 / 1204	0%	0	0 / 0
muscle	2%	0.37	14 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1