SH3BGR report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	3 studies	29% ± 4%	Explore
oligodendrocyte	3 studies	18% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	17% ± 0%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	86%	987.87	2280 / 2642	48%	1.19	340 / 705
adrenal gland	96%	936.48	248 / 258	31%	0.76	71 / 230
prostate	83%	1033.40	204 / 245	27%	0.47	137 / 502
thymus	74%	458.59	485 / 653	32%	0.60	194 / 605
muscle	100%	15214.15	803 / 803	0%	0	0 / 0
blood vessel	100%	2479.50	1330 / 1335	0%	0	0 / 0
heart	96%	3916.47	829 / 861	0%	0	0 / 0
bladder	86%	1016.43	18 / 21	3%	0.06	15 / 504
breast	43%	240.80	197 / 459	46%	1.11	509 / 1118
esophagus	69%	1331.92	1001 / 1445	3%	0.04	5 / 183
intestine	70%	1198.19	678 / 966	1%	0.03	6 / 527
kidney	63%	363.92	56 / 89	6%	0.13	50 / 901
uterus	56%	369.20	95 / 170	10%	0.28	48 / 459
stomach	46%	637.48	164 / 359	4%	0.17	11 / 286
ovary	15%	88.53	27 / 180	13%	0.22	54 / 430
adipose	25%	129.55	301 / 1204	0%	0	0 / 0
lung	18%	102.08	102 / 578	5%	0.07	53 / 1155
pancreas	16%	77.96	52 / 328	2%	0.05	4 / 178
skin	8%	42.21	151 / 1809	3%	0.05	13 / 472
liver	6%	26.45	14 / 226	0%	0.01	1 / 406
spleen	3%	11.53	7 / 241	0%	0	0 / 0
peripheral blood	1%	4.89	7 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1