SETD9 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
dendritic cell	3 studies	23% ± 5%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	274.48	653 / 653	98%	8.72	591 / 605
kidney	100%	321.72	89 / 89	96%	6.61	862 / 901
liver	100%	273.01	226 / 226	95%	6.39	386 / 406
prostate	100%	250.75	245 / 245	95%	7.34	477 / 502
breast	100%	345.68	459 / 459	95%	8.70	1060 / 1118
intestine	99%	309.01	961 / 966	95%	8.00	502 / 527
skin	98%	223.58	1772 / 1809	97%	9.65	456 / 472
pancreas	100%	205.66	328 / 328	94%	5.17	168 / 178
stomach	99%	198.94	354 / 359	95%	7.47	273 / 286
adrenal gland	100%	225.28	258 / 258	93%	6.21	215 / 230
brain	98%	197.15	2585 / 2642	94%	6.31	665 / 705
esophagus	99%	207.61	1433 / 1445	92%	5.69	169 / 183
ovary	98%	172.98	177 / 180	93%	5.99	400 / 430
uterus	98%	194.55	166 / 170	93%	5.72	429 / 459
lung	99%	211.41	570 / 578	92%	6.18	1068 / 1155
bladder	95%	248.14	20 / 21	91%	6.17	461 / 504
adipose	100%	323.07	1204 / 1204	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.04	1 / 1
blood vessel	100%	262.13	1331 / 1335	0%	0	0 / 0
spleen	98%	123.41	237 / 241	0%	0	0 / 0
muscle	98%	250.99	785 / 803	0%	0	0 / 0
heart	97%	297.85	836 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	90%	5.94	72 / 80
tonsil	0%	0	0 / 0	89%	6.14	40 / 45
lymph node	0%	0	0 / 0	76%	3.52	22 / 29
peripheral blood	70%	91.14	653 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0