Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 8 studies | 27% ± 11% | |
astrocyte | 4 studies | 27% ± 8% | |
interneuron | 4 studies | 33% ± 16% | |
pericyte | 4 studies | 23% ± 4% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
glutamatergic neuron | 3 studies | 36% ± 15% | |
GABAergic neuron | 3 studies | 20% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 28% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 89% | 766.53 | 2339 / 2642 | 98% | 20.36 | 688 / 705 |
kidney | 100% | 804.65 | 89 / 89 | 82% | 43.91 | 738 / 901 |
ovary | 66% | 199.59 | 119 / 180 | 66% | 10.83 | 284 / 430 |
thymus | 94% | 445.27 | 612 / 653 | 34% | 1.35 | 203 / 605 |
adrenal gland | 79% | 171.60 | 204 / 258 | 41% | 2.47 | 94 / 230 |
uterus | 88% | 324.98 | 149 / 170 | 23% | 1.44 | 104 / 459 |
heart | 97% | 666.21 | 835 / 861 | 0% | 0 | 0 / 0 |
lung | 65% | 165.93 | 378 / 578 | 21% | 1.06 | 247 / 1155 |
bladder | 67% | 219.81 | 14 / 21 | 14% | 0.99 | 69 / 504 |
prostate | 74% | 210.31 | 181 / 245 | 2% | 0.07 | 11 / 502 |
breast | 58% | 205.12 | 264 / 459 | 12% | 0.55 | 130 / 1118 |
blood vessel | 69% | 300.48 | 917 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 56% | 103.40 | 185 / 328 | 12% | 0.51 | 21 / 178 |
intestine | 63% | 165.78 | 609 / 966 | 5% | 0.17 | 26 / 527 |
adipose | 62% | 244.74 | 747 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 41% | 100.66 | 593 / 1445 | 16% | 1.02 | 30 / 183 |
skin | 43% | 104.75 | 776 / 1809 | 6% | 0.19 | 28 / 472 |
liver | 19% | 27.58 | 44 / 226 | 25% | 1.21 | 103 / 406 |
stomach | 20% | 36.76 | 73 / 359 | 12% | 0.42 | 34 / 286 |
muscle | 16% | 27.57 | 130 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 11% | 0.43 | 5 / 45 |
eye | 0% | 0 | 0 / 0 | 3% | 0.09 | 2 / 80 |
spleen | 1% | 1.61 | 3 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.10 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048675 | Biological process | axon extension |
GO_0050908 | Biological process | detection of light stimulus involved in visual perception |
GO_0071526 | Biological process | semaphorin-plexin signaling pathway |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0001755 | Biological process | neural crest cell migration |
GO_0007411 | Biological process | axon guidance |
GO_0050919 | Biological process | negative chemotaxis |
GO_0005886 | Cellular component | plasma membrane |
GO_0045499 | Molecular function | chemorepellent activity |
GO_0030215 | Molecular function | semaphorin receptor binding |
Gene name | SEMA5B |
Protein name | Semaphorin 5B Semaphorin-5B |
Synonyms | KIAA1445 UNQ5867/PRO34001 SEMAG |
Description | FUNCTION: May act as a positive axonal guidance cue. . |
Accessions | ENST00000195173.8 A0A3B3IT43 ENST00000451541.5 ENST00000475244.5 ENST00000648990.1 ENST00000393583.6 ENST00000357599.8 [Q9P283-1] C9JTX2 ENST00000650207.1 ENST00000451055.6 [Q9P283-4] B5ME80 Q9P283 C9JKR3 ENST00000449546.1 ENST00000616742.4 [Q9P283-1] C9JTV9 F8WAT5 H0Y5U2 A0A3B3IRP9 ENST00000421053.5 |