Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 7 studies | 42% ± 16% | |
glutamatergic neuron | 6 studies | 42% ± 17% | |
retinal bipolar neuron | 5 studies | 42% ± 29% | |
fibroblast | 5 studies | 30% ± 13% | |
endothelial cell | 4 studies | 28% ± 15% | |
epithelial cell | 4 studies | 24% ± 6% | |
interneuron | 4 studies | 29% ± 9% | |
GABAergic interneuron | 3 studies | 43% ± 29% | |
neuron | 3 studies | 46% ± 20% | |
ON-bipolar cell | 3 studies | 37% ± 14% | |
glycinergic amacrine cell | 3 studies | 34% ± 11% | |
rod bipolar cell | 3 studies | 87% ± 15% | |
hepatocyte | 3 studies | 28% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 96% | 399.88 | 234 / 245 | 94% | 14.45 | 472 / 502 |
stomach | 97% | 466.93 | 349 / 359 | 86% | 17.68 | 245 / 286 |
kidney | 100% | 1734.10 | 89 / 89 | 79% | 7.25 | 716 / 901 |
intestine | 92% | 482.07 | 887 / 966 | 86% | 18.57 | 451 / 527 |
lung | 100% | 956.13 | 577 / 578 | 59% | 6.29 | 687 / 1155 |
liver | 100% | 1136.46 | 226 / 226 | 42% | 2.84 | 171 / 406 |
esophagus | 69% | 905.06 | 992 / 1445 | 68% | 15.94 | 124 / 183 |
uterus | 94% | 744.23 | 159 / 170 | 28% | 2.94 | 127 / 459 |
thymus | 94% | 418.19 | 617 / 653 | 22% | 1.47 | 134 / 605 |
pancreas | 37% | 63.69 | 121 / 328 | 78% | 6.02 | 139 / 178 |
bladder | 71% | 329.00 | 15 / 21 | 43% | 6.19 | 217 / 504 |
breast | 78% | 542.13 | 360 / 459 | 34% | 2.48 | 379 / 1118 |
skin | 65% | 286.88 | 1178 / 1809 | 45% | 4.18 | 214 / 472 |
brain | 57% | 150.59 | 1499 / 2642 | 41% | 2.19 | 292 / 705 |
adrenal gland | 34% | 99.10 | 87 / 258 | 43% | 6.85 | 98 / 230 |
blood vessel | 76% | 190.65 | 1009 / 1335 | 0% | 0 | 0 / 0 |
spleen | 69% | 171.85 | 167 / 241 | 0% | 0 | 0 / 0 |
adipose | 56% | 125.16 | 678 / 1204 | 0% | 0 | 0 / 0 |
heart | 56% | 122.97 | 482 / 861 | 0% | 0 | 0 / 0 |
ovary | 42% | 102.67 | 75 / 180 | 13% | 0.53 | 55 / 430 |
eye | 0% | 0 | 0 / 0 | 34% | 1.15 | 27 / 80 |
tonsil | 0% | 0 | 0 / 0 | 16% | 0.78 | 7 / 45 |
peripheral blood | 10% | 55.40 | 94 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.13 | 1 / 29 |
muscle | 1% | 1.67 | 10 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005737 | Cellular component | cytoplasm |
Gene name | SAMD5 |
Protein name | Sterile alpha motif domain-containing protein 5 (SAM domain-containing protein 5) Sterile alpha motif domain containing 5 |
Synonyms | SAMDC1 |
Description | |
Accessions | ENST00000367474.2 Q5TGI4 H3BS43 ENST00000566741.1 |