Insufficient scRNA-seq data for expression of RTL3 at single-cell level.
Insufficient scRNA-seq data for expression of RTL3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
blood vessel | 94% | 133.33 | 1251 / 1335 | 0% | 0 | 0 / 0 |
intestine | 76% | 75.53 | 735 / 966 | 1% | 0.07 | 7 / 527 |
breast | 73% | 42.75 | 336 / 459 | 3% | 0.05 | 35 / 1118 |
esophagus | 74% | 127.00 | 1064 / 1445 | 2% | 0.04 | 4 / 183 |
adipose | 66% | 29.38 | 789 / 1204 | 0% | 0 | 0 / 0 |
uterus | 59% | 56.99 | 101 / 170 | 3% | 0.13 | 15 / 459 |
skin | 59% | 23.52 | 1075 / 1809 | 1% | 0.05 | 7 / 472 |
lung | 60% | 23.18 | 346 / 578 | 1% | 0.02 | 11 / 1155 |
heart | 59% | 29.92 | 509 / 861 | 0% | 0 | 0 / 0 |
stomach | 45% | 104.38 | 160 / 359 | 5% | 0.12 | 13 / 286 |
thymus | 25% | 7.95 | 162 / 653 | 0% | 0 | 0 / 605 |
ovary | 19% | 9.54 | 35 / 180 | 4% | 0.06 | 17 / 430 |
bladder | 19% | 7.52 | 4 / 21 | 0% | 0.01 | 1 / 504 |
prostate | 18% | 5.67 | 45 / 245 | 0% | 0.00 | 1 / 502 |
pancreas | 11% | 2.43 | 37 / 328 | 1% | 0.05 | 1 / 178 |
muscle | 12% | 3.28 | 95 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 6% | 1.64 | 52 / 929 | 0% | 0 | 0 / 0 |
spleen | 3% | 0.56 | 7 / 241 | 0% | 0 | 0 / 0 |
kidney | 1% | 0.22 | 1 / 89 | 1% | 0.02 | 6 / 901 |
adrenal gland | 1% | 0.23 | 3 / 258 | 0% | 0.01 | 1 / 230 |
brain | 0% | 0.04 | 5 / 2642 | 1% | 0.03 | 5 / 705 |
liver | 0% | 0.33 | 1 / 226 | 0% | 0.00 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005634 | Cellular component | nucleus |
GO_0008270 | Molecular function | zinc ion binding |
GO_0003676 | Molecular function | nucleic acid binding |
Gene name | RTL3 |
Protein name | Retrotransposon Gag-like protein 3 (Zinc finger CCHC domain-containing protein 5) |
Synonyms | MAR3 ZCCHC5 MART3 |
Description | FUNCTION: May function as a transcriptional regulator. Plays a role in postnatal myogenesis, may be involved in the regulation of satellite cells self-renewal. . |
Accessions | ENST00000321110.2 Q8N8U3 |