RRP15 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	6 studies	21% ± 5%	Explore
epithelial cell	5 studies	32% ± 14%	Explore
basal cell	5 studies	25% ± 6%	Explore
pericyte	3 studies	18% ± 2%	Explore
B cell	3 studies	19% ± 2%	Explore
fibroblast	3 studies	20% ± 3%	Explore
ciliated cell	3 studies	24% ± 2%	Explore
GABAergic neuron	3 studies	32% ± 4%	Explore
glutamatergic neuron	3 studies	43% ± 5%	Explore
dendritic cell	3 studies	22% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	28% ± 9%	Explore
liver	3 studies	32% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	1427.62	459 / 459	100%	16.33	1118 / 1118
uterus	100%	1376.79	170 / 170	100%	12.66	459 / 459
esophagus	100%	1142.42	1444 / 1445	100%	12.36	183 / 183
ovary	100%	1222.52	180 / 180	100%	9.16	429 / 430
prostate	100%	1040.31	245 / 245	100%	9.22	500 / 502
lung	99%	1117.95	575 / 578	100%	11.91	1155 / 1155
bladder	100%	1361.71	21 / 21	99%	10.44	501 / 504
brain	99%	662.84	2615 / 2642	100%	10.34	705 / 705
thymus	100%	1122.96	653 / 653	99%	8.71	598 / 605
stomach	100%	872.14	359 / 359	99%	10.99	282 / 286
intestine	100%	1117.89	966 / 966	98%	10.52	519 / 527
pancreas	99%	660.05	326 / 328	99%	8.67	176 / 178
skin	100%	1514.53	1809 / 1809	98%	17.18	463 / 472
liver	100%	578.73	225 / 226	99%	7.94	400 / 406
kidney	100%	781.34	89 / 89	97%	7.71	876 / 901
adrenal gland	100%	973.62	258 / 258	94%	7.16	217 / 230
adipose	100%	1435.98	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1227.40	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	9.66	29 / 29
muscle	100%	2237.34	803 / 803	0%	0	0 / 0
spleen	100%	1003.68	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	9.95	45 / 45
ureter	0%	0	0 / 0	100%	8.74	1 / 1
heart	97%	1040.68	832 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	93%	6.78	74 / 80
peripheral blood	36%	445.90	333 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0