RPTN | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of RPTN at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
skin	71%	732.57	1277 / 1809	10%	1.12	47 / 472
tonsil	0%	0	0 / 0	49%	6.61	22 / 45
esophagus	12%	34.67	178 / 1445	30%	12.14	55 / 183
uterus	2%	29.66	3 / 170	17%	2.56	76 / 459
lung	0%	0.16	1 / 578	16%	1.77	180 / 1155
bladder	0%	0	0 / 21	6%	0.51	30 / 504
intestine	0%	0	0 / 966	3%	0.25	17 / 527
pancreas	0%	0	0 / 328	3%	0.08	5 / 178
kidney	0%	0	0 / 89	2%	0.18	16 / 901
stomach	0%	0	0 / 359	2%	0.04	5 / 286
muscle	1%	2.96	11 / 803	0%	0	0 / 0
breast	0%	0	0 / 459	1%	0.05	15 / 1118
prostate	0%	0	0 / 245	1%	0.01	3 / 502
ovary	0%	0	0 / 180	0%	0.08	1 / 430
thymus	0%	0	0 / 653	0%	0.00	1 / 605
blood vessel	0%	0.35	2 / 1335	0%	0	0 / 0
adipose	0%	1.17	1 / 1204	0%	0	0 / 0
brain	0%	0.04	1 / 2642	0%	0	0 / 705
abdomen	0%	0	0 / 0	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0	0 / 230
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
liver	0%	0	0 / 226	0%	0	0 / 406
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0001533	Cellular component	cornified envelope
GO_0005829	Cellular component	cytosol
GO_0005576	Cellular component	extracellular region
GO_0005509	Molecular function	calcium ion binding
GO_0046914	Molecular function	transition metal ion binding

Gene name	RPTN
Protein name	Repetin RPTN protein
Synonyms
Description	FUNCTION: Involved in the cornified cell envelope formation. Multifunctional epidermal matrix protein. Reversibly binds calcium.
Accessions	Q2M1U7 Q6XPR3 Q2M1U5 ENST00000316073.3

RPTN report