Insufficient scRNA-seq data for expression of RNF212 at single-cell level.
Insufficient scRNA-seq data for expression of RNF212 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 521.79 | 653 / 653 | 69% | 5.64 | 415 / 605 |
ovary | 100% | 849.56 | 180 / 180 | 68% | 15.42 | 292 / 430 |
uterus | 97% | 238.36 | 165 / 170 | 64% | 13.50 | 295 / 459 |
lung | 98% | 191.87 | 564 / 578 | 47% | 5.40 | 548 / 1155 |
kidney | 100% | 434.52 | 89 / 89 | 43% | 3.32 | 383 / 901 |
prostate | 99% | 298.16 | 242 / 245 | 34% | 1.79 | 173 / 502 |
breast | 99% | 299.93 | 456 / 459 | 30% | 2.31 | 339 / 1118 |
pancreas | 100% | 710.11 | 328 / 328 | 25% | 1.27 | 44 / 178 |
esophagus | 97% | 205.24 | 1406 / 1445 | 16% | 1.21 | 30 / 183 |
adrenal gland | 90% | 130.25 | 233 / 258 | 21% | 1.34 | 49 / 230 |
bladder | 100% | 132.00 | 21 / 21 | 11% | 0.93 | 53 / 504 |
intestine | 95% | 212.93 | 921 / 966 | 11% | 0.59 | 60 / 527 |
skin | 88% | 159.65 | 1597 / 1809 | 14% | 1.18 | 66 / 472 |
brain | 97% | 362.84 | 2559 / 2642 | 5% | 0.35 | 33 / 705 |
adipose | 100% | 253.40 | 1199 / 1204 | 0% | 0 | 0 / 0 |
stomach | 82% | 115.75 | 296 / 359 | 13% | 0.70 | 38 / 286 |
spleen | 95% | 137.18 | 228 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 71% | 13.40 | 32 / 45 |
blood vessel | 41% | 48.51 | 544 / 1335 | 0% | 0 | 0 / 0 |
heart | 35% | 37.69 | 299 / 861 | 0% | 0 | 0 / 0 |
muscle | 11% | 13.43 | 88 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 8% | 0.27 | 6 / 80 |
peripheral blood | 6% | 12.95 | 54 / 929 | 0% | 0 | 0 / 0 |
liver | 2% | 1.64 | 5 / 226 | 3% | 0.28 | 14 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007131 | Biological process | reciprocal meiotic recombination |
GO_0051026 | Biological process | chiasma assembly |
GO_0016925 | Biological process | protein sumoylation |
GO_0006311 | Biological process | meiotic gene conversion |
GO_0007129 | Biological process | homologous chromosome pairing at meiosis |
GO_0000795 | Cellular component | synaptonemal complex |
GO_0019789 | Molecular function | SUMO transferase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | RNF212 |
Protein name | Ring finger protein 212 Probable E3 SUMO-protein ligase RNF212 (EC 2.3.2.-) (Probable E3 SUMO-protein transferase RNF212) (RING finger protein 212) |
Synonyms | |
Description | FUNCTION: SUMO E3 ligase that acts as a regulator of crossing-over during meiosis: required to couple chromosome synapsis to the formation of crossover-specific recombination complexes. Localizes to recombination sites and stabilizes meiosis-specific recombination factors, such as MutS-gamma complex proteins (MSH4 and MSH5) and TEX11. May mediate sumoylation of target proteins MSH4 and/or MSH5, leading to enhance their binding to recombination sites. Acts as a limiting factor for crossover designation and/or reinforcement and plays an antagonist role with CCNB1IP1/HEI10 in the regulation of meiotic recombination (By similarity). . |
Accessions | Q495C1 ENST00000508428.5 D6R9L2 ENST00000333673.5 [Q495C1-6] ENST00000506730.5 ENST00000433731.7 [Q495C1-1] ENST00000511620.5 [Q495C1-2] D6RA97 A0A8V8TN20 ENST00000698262.1 ENST00000510715.5 ENST00000382968.9 [Q495C1-5] |