Name | Number of supported studies | Average coverage | |
---|---|---|---|
goblet cell | 10 studies | 58% ± 20% | |
enteroendocrine cell | 4 studies | 27% ± 6% |
Insufficient scRNA-seq data for expression of REG4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 3001.07 | 328 / 328 | 68% | 649.93 | 121 / 178 |
intestine | 56% | 3955.53 | 542 / 966 | 78% | 604.25 | 410 / 527 |
stomach | 43% | 161.66 | 156 / 359 | 69% | 371.72 | 198 / 286 |
prostate | 55% | 143.47 | 135 / 245 | 22% | 15.33 | 109 / 502 |
bladder | 24% | 13.24 | 5 / 21 | 22% | 159.25 | 111 / 504 |
esophagus | 2% | 35.79 | 30 / 1445 | 40% | 317.20 | 73 / 183 |
lung | 1% | 1.32 | 3 / 578 | 13% | 85.88 | 145 / 1155 |
peripheral blood | 9% | 5.67 | 84 / 929 | 0% | 0 | 0 / 0 |
liver | 3% | 0.99 | 6 / 226 | 1% | 0.81 | 4 / 406 |
uterus | 1% | 0.22 | 1 / 170 | 3% | 8.06 | 13 / 459 |
breast | 2% | 3.98 | 9 / 459 | 0% | 0.03 | 2 / 1118 |
spleen | 2% | 0.95 | 5 / 241 | 0% | 0 | 0 / 0 |
adipose | 1% | 1.12 | 10 / 1204 | 0% | 0 | 0 / 0 |
skin | 0% | 0.31 | 8 / 1809 | 0% | 0.12 | 1 / 472 |
blood vessel | 1% | 1.71 | 7 / 1335 | 0% | 0 | 0 / 0 |
ovary | 0% | 0 | 0 / 180 | 0% | 0.21 | 2 / 430 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0.03 | 1 / 230 |
heart | 0% | 0.17 | 2 / 861 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.04 | 2 / 901 |
brain | 0% | 0.11 | 4 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 0% | 0 | 0 / 605 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009617 | Biological process | response to bacterium |
GO_0005576 | Cellular component | extracellular region |
GO_0005737 | Cellular component | cytoplasm |
GO_0008201 | Molecular function | heparin binding |
GO_2001065 | Molecular function | mannan binding |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | REG4 |
Protein name | Regenerating islet-derived protein 4 (REG-4) (Gastrointestinal secretory protein) (REG-like protein) (Regenerating islet-derived protein IV) (Reg IV) Regenerating family member 4 |
Synonyms | RELP GISP |
Description | FUNCTION: Calcium-independent lectin displaying mannose-binding specificity and able to maintain carbohydrate recognition activity in an acidic environment. May be involved in inflammatory and metaplastic responses of the gastrointestinal epithelium. . |
Accessions | ENST00000530654.1 ENST00000369401.4 [Q9BYZ8-2] ENST00000256585.10 [Q9BYZ8-1] E9PNV6 Q9BYZ8 ENST00000354219.5 [Q9BYZ8-1] |