Insufficient scRNA-seq data for expression of RAB40A at single-cell level.
Insufficient scRNA-seq data for expression of RAB40A at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 89% | 95.94 | 2358 / 2642 | 55% | 0.88 | 387 / 705 |
prostate | 99% | 283.40 | 243 / 245 | 28% | 0.52 | 143 / 502 |
bladder | 100% | 213.10 | 21 / 21 | 22% | 0.36 | 110 / 504 |
kidney | 96% | 80.66 | 85 / 89 | 24% | 0.43 | 220 / 901 |
adrenal gland | 99% | 102.58 | 256 / 258 | 18% | 0.34 | 42 / 230 |
lung | 97% | 138.90 | 563 / 578 | 19% | 0.37 | 223 / 1155 |
ovary | 100% | 387.06 | 180 / 180 | 16% | 0.24 | 68 / 430 |
uterus | 99% | 312.98 | 169 / 170 | 13% | 0.24 | 58 / 459 |
thymus | 97% | 80.22 | 635 / 653 | 10% | 0.13 | 61 / 605 |
esophagus | 94% | 161.51 | 1352 / 1445 | 11% | 0.14 | 20 / 183 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.02 | 1 / 1 |
blood vessel | 95% | 92.72 | 1269 / 1335 | 0% | 0 | 0 / 0 |
breast | 90% | 93.37 | 411 / 459 | 5% | 0.10 | 59 / 1118 |
skin | 78% | 76.22 | 1416 / 1809 | 16% | 0.25 | 76 / 472 |
adipose | 91% | 120.04 | 1091 / 1204 | 0% | 0 | 0 / 0 |
spleen | 90% | 56.31 | 218 / 241 | 0% | 0 | 0 / 0 |
intestine | 84% | 52.50 | 811 / 966 | 4% | 0.06 | 23 / 527 |
stomach | 82% | 53.77 | 294 / 359 | 5% | 0.08 | 13 / 286 |
pancreas | 44% | 18.45 | 144 / 328 | 10% | 0.18 | 17 / 178 |
heart | 50% | 27.89 | 429 / 861 | 0% | 0 | 0 / 0 |
liver | 16% | 5.96 | 37 / 226 | 4% | 0.05 | 15 / 406 |
peripheral blood | 19% | 13.25 | 175 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.09 | 2 / 29 |
eye | 0% | 0 | 0 / 0 | 6% | 0.09 | 5 / 80 |
muscle | 6% | 2.14 | 48 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0006887 | Biological process | exocytosis |
GO_0009306 | Biological process | protein secretion |
GO_0005768 | Cellular component | endosome |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0005525 | Molecular function | GTP binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB40A |
Protein name | Ras-related protein Rab-40A (SOCS box-containing protein RAR2A) (Protein Rar-2) |
Synonyms | |
Description | FUNCTION: May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. . |
Accessions | ENST00000304236.2 ENST00000372633.1 Q8WXH6 |