Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 16 studies | 67% ± 18% | |
oligodendrocyte precursor cell | 7 studies | 26% ± 8% | |
retinal pigment epithelial cell | 4 studies | 35% ± 15% | |
GABAergic neuron | 4 studies | 33% ± 8% | |
astrocyte | 4 studies | 27% ± 5% | |
endothelial cell | 3 studies | 38% ± 17% | |
epithelial cell | 3 studies | 23% ± 5% | |
glutamatergic neuron | 3 studies | 34% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 38% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 11461.59 | 2617 / 2642 | 97% | 25.35 | 683 / 705 |
thymus | 100% | 37355.24 | 652 / 653 | 91% | 25.80 | 551 / 605 |
prostate | 84% | 4496.71 | 205 / 245 | 99% | 35.48 | 498 / 502 |
pancreas | 100% | 3715.82 | 328 / 328 | 74% | 6.76 | 132 / 178 |
kidney | 98% | 2364.16 | 87 / 89 | 72% | 7.09 | 647 / 901 |
skin | 71% | 2401.27 | 1288 / 1809 | 94% | 24.28 | 442 / 472 |
stomach | 73% | 2089.69 | 262 / 359 | 91% | 10.28 | 259 / 286 |
adrenal gland | 100% | 3085.19 | 257 / 258 | 49% | 2.80 | 113 / 230 |
intestine | 52% | 2090.37 | 505 / 966 | 92% | 11.00 | 486 / 527 |
breast | 48% | 1001.51 | 222 / 459 | 64% | 4.41 | 713 / 1118 |
bladder | 38% | 984.38 | 8 / 21 | 66% | 6.48 | 335 / 504 |
eye | 0% | 0 | 0 / 0 | 100% | 47.87 | 80 / 80 |
esophagus | 17% | 227.47 | 244 / 1445 | 76% | 9.64 | 139 / 183 |
ovary | 2% | 25.58 | 3 / 180 | 69% | 5.47 | 297 / 430 |
uterus | 8% | 187.26 | 13 / 170 | 56% | 4.53 | 255 / 459 |
lung | 2% | 25.69 | 12 / 578 | 38% | 2.97 | 443 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 40% | 2.66 | 18 / 45 |
spleen | 12% | 200.45 | 30 / 241 | 0% | 0 | 0 / 0 |
liver | 1% | 15.42 | 3 / 226 | 7% | 0.31 | 27 / 406 |
adipose | 7% | 125.61 | 81 / 1204 | 0% | 0 | 0 / 0 |
muscle | 6% | 111.58 | 45 / 803 | 0% | 0 | 0 / 0 |
heart | 3% | 33.05 | 25 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 4.49 | 4 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005856 | Cellular component | cytoskeleton |
Gene name | PLEKHH1 |
Protein name | Pleckstrin homology, MyTH4 and FERM domain containing H1 Pleckstrin homology domain-containing family H member 1 (PH domain-containing family H member 1) |
Synonyms | KIAA1200 |
Description | |
Accessions | ENST00000561057.1 H0YKY5 ENST00000329153.10 [Q9ULM0-1] ENST00000561370.5 H0YLU5 ENST00000559168.1 H0YMQ6 Q9ULM0 |