PLEKHD1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retina horizontal cell	5 studies	49% ± 14%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	596.48	653 / 653	30%	1.35	179 / 605
breast	60%	123.55	274 / 459	52%	2.55	583 / 1118
kidney	96%	278.24	85 / 89	8%	0.67	75 / 901
skin	70%	243.57	1275 / 1809	0%	0.00	1 / 472
brain	67%	444.98	1767 / 2642	3%	0.05	24 / 705
lung	57%	48.20	328 / 578	9%	0.25	103 / 1155
spleen	52%	30.98	126 / 241	0%	0	0 / 0
prostate	26%	13.37	64 / 245	2%	0.04	12 / 502
stomach	23%	12.83	81 / 359	5%	0.12	13 / 286
adipose	27%	21.41	324 / 1204	0%	0	0 / 0
uterus	10%	6.23	17 / 170	13%	0.45	59 / 459
esophagus	8%	4.28	119 / 1445	10%	0.20	19 / 183
blood vessel	18%	10.24	235 / 1335	0%	0	0 / 0
ovary	4%	2.35	8 / 180	12%	0.25	53 / 430
peripheral blood	13%	6.92	121 / 929	0%	0	0 / 0
intestine	10%	5.32	98 / 966	2%	0.05	13 / 527
adrenal gland	10%	5.88	26 / 258	0%	0.01	1 / 230
bladder	5%	3.00	1 / 21	4%	0.09	22 / 504
heart	8%	3.96	71 / 861	0%	0	0 / 0
pancreas	6%	2.91	19 / 328	1%	0.02	2 / 178
muscle	6%	4.03	51 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	4%	0.08	2 / 45
liver	1%	0.47	2 / 226	2%	0.04	7 / 406
eye	0%	0	0 / 0	1%	0.05	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1