Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 6 studies | 28% ± 11% | |
endothelial cell | 4 studies | 26% ± 10% | |
glutamatergic neuron | 4 studies | 45% ± 14% | |
microglial cell | 3 studies | 18% ± 2% | |
epithelial cell | 3 studies | 24% ± 6% | |
GABAergic neuron | 3 studies | 40% ± 7% | |
neuron | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 32% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1091.10 | 1445 / 1445 | 100% | 7.48 | 183 / 183 |
lung | 100% | 1092.12 | 577 / 578 | 100% | 6.14 | 1155 / 1155 |
intestine | 100% | 1125.98 | 966 / 966 | 100% | 5.70 | 526 / 527 |
stomach | 100% | 783.61 | 359 / 359 | 100% | 5.92 | 285 / 286 |
bladder | 100% | 1150.48 | 21 / 21 | 100% | 5.28 | 502 / 504 |
brain | 100% | 949.27 | 2631 / 2642 | 100% | 6.18 | 705 / 705 |
uterus | 100% | 1441.04 | 170 / 170 | 99% | 5.42 | 456 / 459 |
breast | 100% | 1154.04 | 459 / 459 | 99% | 6.87 | 1110 / 1118 |
prostate | 100% | 1179.60 | 245 / 245 | 99% | 3.54 | 496 / 502 |
skin | 100% | 1188.23 | 1808 / 1809 | 99% | 7.79 | 465 / 472 |
pancreas | 100% | 601.09 | 327 / 328 | 98% | 4.17 | 175 / 178 |
kidney | 100% | 1051.71 | 89 / 89 | 98% | 4.68 | 883 / 901 |
thymus | 100% | 946.75 | 652 / 653 | 97% | 2.95 | 589 / 605 |
adrenal gland | 100% | 638.95 | 258 / 258 | 93% | 2.66 | 213 / 230 |
ovary | 100% | 1271.02 | 180 / 180 | 92% | 2.95 | 394 / 430 |
liver | 99% | 484.58 | 223 / 226 | 81% | 1.94 | 328 / 406 |
adipose | 100% | 1073.64 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1167.30 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 3.23 | 29 / 29 |
spleen | 100% | 644.34 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 4.38 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.85 | 1 / 1 |
heart | 96% | 563.34 | 828 / 861 | 0% | 0 | 0 / 0 |
muscle | 94% | 391.15 | 752 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 79% | 2.13 | 63 / 80 |
peripheral blood | 48% | 494.22 | 446 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0120009 | Biological process | intermembrane lipid transfer |
GO_0015031 | Biological process | protein transport |
GO_1902389 | Biological process | ceramide 1-phosphate transport |
GO_0035621 | Biological process | ER to Golgi ceramide transport |
GO_0035627 | Biological process | ceramide transport |
GO_0046836 | Biological process | glycolipid transport |
GO_0006869 | Biological process | lipid transport |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_1902388 | Molecular function | ceramide 1-phosphate transfer activity |
GO_0017089 | Molecular function | glycolipid transfer activity |
GO_0097001 | Molecular function | ceramide binding |
GO_0070273 | Molecular function | phosphatidylinositol-4-phosphate binding |
GO_1902387 | Molecular function | ceramide 1-phosphate binding |
GO_0051861 | Molecular function | glycolipid binding |
Gene name | PLEKHA8 |
Protein name | Pleckstrin homology domain containing A8 Pleckstrin homology domain-containing family A member 8 (Phosphatidylinositol-four-phosphate adapter protein 2) Pleckstrin homology domain-containing family A member 8 (PH domain-containing family A member 8) (Phosphatidylinositol-four-phosphate adapter protein 2) (FAPP-2) (Phosphoinositol 4-phosphate adapter protein 2) (hFAPP2) (Serologically defined breast cancer antigen NY-BR-86) |
Synonyms | FAPP2 |
Description | FUNCTION: Cargo transport protein that is required for apical transport from the Golgi complex. Transports AQP2 from the trans-Golgi network (TGN) to sites of AQP2 phosphorylation. Mediates the non-vesicular transport of glucosylceramide (GlcCer) from the trans-Golgi network (TGN) to the plasma membrane and plays a pivotal role in the synthesis of complex glycosphingolipids. Binding of both phosphatidylinositol 4-phosphate (PIP) and ARF1 are essential for the GlcCer transfer ability. Also required for primary cilium formation, possibly by being involved in the transport of raft lipids to the apical membrane, and for membrane tubulation. . |
Accessions | ENST00000649443.1 Q96JA3 A0A2P1JJM6 ENST00000449726.6 [Q96JA3-1] A0A3B3IST3 ENST00000440706.3 [Q96JA3-1] B5MDU3 ENST00000396259.5 ENST00000622102.4 ENST00000396257.6 [Q96JA3-2] A0A087X1S6 ENST00000258679.11 [Q96JA3-3] |