Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 25% ± 7% | |
endothelial cell | 3 studies | 28% ± 6% | |
GABAergic neuron | 3 studies | 29% ± 11% | |
glutamatergic neuron | 3 studies | 38% ± 13% | |
astrocyte | 3 studies | 24% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 26% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 5715.00 | 21 / 21 | 100% | 20.30 | 504 / 504 |
breast | 100% | 4929.23 | 459 / 459 | 100% | 21.60 | 1118 / 1118 |
esophagus | 100% | 5438.87 | 1445 / 1445 | 100% | 20.55 | 183 / 183 |
intestine | 100% | 4836.21 | 966 / 966 | 100% | 18.07 | 527 / 527 |
lung | 100% | 4984.67 | 578 / 578 | 100% | 18.07 | 1155 / 1155 |
ovary | 100% | 6513.28 | 180 / 180 | 100% | 22.84 | 430 / 430 |
prostate | 100% | 5784.09 | 245 / 245 | 100% | 22.09 | 502 / 502 |
skin | 100% | 5278.08 | 1809 / 1809 | 100% | 25.59 | 472 / 472 |
stomach | 100% | 3954.94 | 359 / 359 | 100% | 18.07 | 286 / 286 |
uterus | 100% | 5810.73 | 170 / 170 | 100% | 17.14 | 458 / 459 |
pancreas | 100% | 3073.21 | 327 / 328 | 100% | 16.14 | 178 / 178 |
thymus | 100% | 6012.01 | 653 / 653 | 100% | 16.42 | 603 / 605 |
kidney | 100% | 4227.43 | 89 / 89 | 100% | 16.42 | 898 / 901 |
brain | 99% | 4151.21 | 2627 / 2642 | 100% | 14.59 | 705 / 705 |
liver | 100% | 3177.70 | 225 / 226 | 99% | 12.82 | 403 / 406 |
adrenal gland | 100% | 8267.71 | 258 / 258 | 98% | 16.53 | 226 / 230 |
adipose | 100% | 4977.52 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7023.22 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 25.91 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.77 | 29 / 29 |
muscle | 100% | 6862.84 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3935.67 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.28 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.04 | 1 / 1 |
heart | 98% | 4734.73 | 844 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 73% | 1788.64 | 675 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016485 | Biological process | protein processing |
GO_0006626 | Biological process | protein targeting to mitochondrion |
GO_0006508 | Biological process | proteolysis |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0004222 | Molecular function | metalloendopeptidase activity |
GO_0008047 | Molecular function | enzyme activator activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0008237 | Molecular function | metallopeptidase activity |
Gene name | PITRM1 |
Protein name | Presequence protease, mitochondrial Pitrilysin metallopeptidase 1 Presequence protease, mitochondrial (hPreP) (EC 3.4.24.-) (Pitrilysin metalloproteinase 1) (Metalloprotease 1) (hMP1) Presequence protease, mitochondrial (Pitrilysin metalloproteinase 1) Pitrilysin metalloproteinase 1 |
Synonyms | KIAA1104 MP1 PREP |
Description | FUNCTION: Metalloendopeptidase of the mitochondrial matrix that functions in peptide cleavage and degradation rather than in protein processing . Has an ATP-independent activity . Specifically cleaves peptides in the range of 5 to 65 residues . Shows a preference for cleavage after small polar residues and before basic residues, but without any positional preference . Degrades the transit peptides of mitochondrial proteins after their cleavage . Also degrades other unstructured peptides . It is also able to degrade amyloid-beta protein 40, one of the peptides produced by APP processing, when it accumulates in mitochondrion . It is a highly efficient protease, at least toward amyloid-beta protein 40 . Cleaves that peptide at a specific position and is probably not processive, releasing digested peptides intermediates that can be further cleaved subsequently . It is also able to degrade amyloid-beta protein 42 . . |
Accessions | ENST00000451454.5 ENST00000678601.1 A0A7I2V4N3 ENST00000678403.1 ENST00000678663.1 ENST00000678987.1 ENST00000678855.1 ENST00000677305.1 A0A7I2YQX5 ENST00000430362.2 A0A7I2V2T0 A0A7I2V5H2 ENST00000679210.1 ENST00000380994.6 ENST00000677001.1 ENST00000677384.1 B1APQ1 ENST00000678441.1 ENST00000424714.1 B1APQ0 H0Y7L7 ENST00000451104.6 [Q5JRX3-3] ENST00000380989.6 [Q5JRX3-2] ENST00000678811.1 ENST00000679134.1 H0Y4F7 ENST00000224949.9 [Q5JRX3-1] ENST00000676953.1 A0A7I2V3L7 A0A7I2V449 A0A7I2V5K2 A0A7I2V4X7 A0A0A0MRX9 A0A7I2V3X0 Q5JRX3 ENST00000678972.1 A0A7I2V3B6 ENST00000677817.1 B4DEU0 A0A7I2V5R2 ENST00000677922.1 A0A7I2YQT2 ENST00000679309.1 ENST00000678436.1 A0A7I2V5C6 ENST00000455371.5 ENST00000678370.1 A0A7I2V397 |