I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 4 studies | 22% ± 8% | |
| epithelial cell | 3 studies | 16% ± 1% | |
| GABAergic neuron | 3 studies | 35% ± 1% | |
| glutamatergic neuron | 3 studies | 44% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| astrocyte | 4 studies | 22% ± 8% | |
| epithelial cell | 3 studies | 16% ± 1% | |
| GABAergic neuron | 3 studies | 35% ± 1% | |
| glutamatergic neuron | 3 studies | 44% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 31% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 360.46 | 1444 / 1445 | 99% | 7.24 | 182 / 183 |
| lung | 99% | 416.55 | 575 / 578 | 99% | 6.65 | 1149 / 1155 |
| breast | 100% | 465.63 | 459 / 459 | 98% | 7.73 | 1092 / 1118 |
| pancreas | 100% | 241.46 | 327 / 328 | 98% | 6.16 | 174 / 178 |
| prostate | 100% | 458.71 | 245 / 245 | 97% | 6.56 | 489 / 502 |
| thymus | 100% | 666.70 | 653 / 653 | 97% | 8.70 | 588 / 605 |
| ovary | 100% | 359.96 | 180 / 180 | 97% | 5.66 | 417 / 430 |
| kidney | 100% | 411.72 | 89 / 89 | 97% | 7.07 | 872 / 901 |
| stomach | 100% | 329.67 | 359 / 359 | 97% | 5.92 | 276 / 286 |
| skin | 100% | 490.32 | 1806 / 1809 | 96% | 8.76 | 455 / 472 |
| bladder | 100% | 399.90 | 21 / 21 | 95% | 5.40 | 477 / 504 |
| intestine | 100% | 406.35 | 966 / 966 | 94% | 5.17 | 495 / 527 |
| uterus | 100% | 379.98 | 170 / 170 | 90% | 4.58 | 412 / 459 |
| adrenal gland | 100% | 451.60 | 257 / 258 | 90% | 5.30 | 206 / 230 |
| brain | 98% | 233.88 | 2586 / 2642 | 87% | 3.54 | 610 / 705 |
| liver | 100% | 208.38 | 226 / 226 | 80% | 3.51 | 325 / 406 |
| adipose | 100% | 433.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 612.72 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.33 | 1 / 1 |
| blood vessel | 100% | 477.49 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 98% | 595.85 | 906 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 90% | 6.37 | 72 / 80 |
| heart | 89% | 156.86 | 769 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 89% | 3.89 | 40 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 86% | 4.92 | 25 / 29 |
| muscle | 64% | 72.79 | 511 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0016254 | Biological process | preassembly of GPI anchor in ER membrane |
| GO_0097502 | Biological process | mannosylation |
| GO_0006506 | Biological process | GPI anchor biosynthetic process |
| GO_0016020 | Cellular component | membrane |
| GO_0005789 | Cellular component | endoplasmic reticulum membrane |
| GO_0000026 | Molecular function | alpha-1,2-mannosyltransferase activity |
| GO_0004376 | Molecular function | glycolipid mannosyltransferase activity |
| GO_0000030 | Molecular function | mannosyltransferase activity |
| Gene name | PIGB |
| Protein name | GPI mannosyltransferase 3 (EC 2.4.1.-) (GPI mannosyltransferase III) (GPI-MT-III) (Phosphatidylinositol-glycan biosynthesis class B protein) (PIG-B) Mannosyltransferase (EC 2.4.1.-) Phosphatidylinositol glycan anchor biosynthesis class B |
| Synonyms | |
| Description | FUNCTION: Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the third alpha-1,2-mannose to Man2-GlcN-acyl-PI during GPI precursor assembly. . FUNCTION: Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the third alpha-1,2-mannose to Man2-GlcN-acyl-PI during GPI precursor assembly. . FUNCTION: Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the third alpha-1,2-mannose to Man2-GlcN-acyl-PI during GPI precursor assembly. . FUNCTION: Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the third alpha-1,2-mannose to Man2-GlcN-acyl-PI during GPI precursor assembly. . |
| Accessions | ENST00000565502.5 ENST00000539642.5 H3BRK6 Q92521 ENST00000164305.10 H3BNW7 H3BS45 F5H1S1 H3BQU3 ENST00000565367.5 ENST00000570059.1 ENST00000566999.5 |
