PI15 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
smooth muscle cell	7 studies	26% ± 18%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	5998.27	245 / 245	94%	66.65	471 / 502
breast	84%	6819.74	384 / 459	58%	40.15	649 / 1118
uterus	100%	3131.17	170 / 170	29%	10.21	132 / 459
lung	64%	724.54	370 / 578	60%	4.93	688 / 1155
intestine	93%	2265.13	900 / 966	28%	2.42	149 / 527
esophagus	44%	293.81	630 / 1445	72%	9.20	132 / 183
bladder	81%	709.00	17 / 21	32%	1.72	160 / 504
ovary	93%	1959.16	167 / 180	13%	0.97	56 / 430
adrenal gland	50%	319.79	128 / 258	37%	1.79	85 / 230
skin	20%	55.89	361 / 1809	62%	29.50	294 / 472
pancreas	8%	30.99	26 / 328	68%	5.21	121 / 178
spleen	73%	419.01	177 / 241	0%	0	0 / 0
stomach	30%	182.43	107 / 359	33%	4.53	95 / 286
blood vessel	60%	570.88	796 / 1335	0%	0	0 / 0
kidney	40%	258.81	36 / 89	7%	0.44	65 / 901
brain	31%	132.78	806 / 2642	14%	0.81	99 / 705
thymus	35%	189.46	226 / 653	3%	0.13	20 / 605
heart	36%	305.15	310 / 861	0%	0	0 / 0
adipose	33%	297.75	401 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	31%	6.04	9 / 29
liver	6%	24.61	14 / 226	11%	0.77	46 / 406
tonsil	0%	0	0 / 0	16%	0.66	7 / 45
muscle	9%	24.58	69 / 803	0%	0	0 / 0
peripheral blood	0%	1.30	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1