PET117 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	3 studies	29% ± 9%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	79.64	1445 / 1445	93%	2.43	170 / 183
ovary	100%	81.43	180 / 180	91%	2.52	392 / 430
stomach	100%	98.41	359 / 359	89%	2.67	255 / 286
intestine	100%	99.16	966 / 966	84%	2.22	442 / 527
adrenal gland	100%	138.75	258 / 258	77%	1.47	178 / 230
prostate	100%	87.97	245 / 245	74%	1.35	371 / 502
bladder	100%	83.48	21 / 21	69%	1.60	346 / 504
uterus	100%	79.01	170 / 170	67%	1.41	308 / 459
brain	100%	120.60	2641 / 2642	64%	1.09	453 / 705
lung	99%	70.57	575 / 578	62%	1.37	716 / 1155
pancreas	100%	53.29	327 / 328	59%	1.06	105 / 178
thymus	100%	86.26	653 / 653	56%	0.94	337 / 605
kidney	100%	110.53	89 / 89	55%	0.98	495 / 901
breast	100%	75.47	459 / 459	54%	1.04	606 / 1118
liver	100%	58.80	226 / 226	52%	1.06	212 / 406
skin	100%	80.46	1807 / 1809	47%	0.83	222 / 472
muscle	100%	101.05	803 / 803	0%	0	0 / 0
spleen	100%	74.27	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.01	1 / 1
adipose	100%	70.40	1203 / 1204	0%	0	0 / 0
blood vessel	100%	69.49	1333 / 1335	0%	0	0 / 0
heart	98%	60.25	843 / 861	0%	0	0 / 0
peripheral blood	48%	26.17	448 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	39%	0.56	31 / 80
lymph node	0%	0	0 / 0	38%	0.64	11 / 29
tonsil	0%	0	0 / 0	33%	0.57	15 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0