PDXDC2P report

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I. Expression across cell types

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	34% ± 18%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	629.10	21 / 21	2%	0.04	8 / 504
stomach	100%	1048.16	359 / 359	1%	0.04	3 / 286
breast	100%	953.49	459 / 459	1%	0.02	10 / 1118
lung	99%	841.71	575 / 578	1%	0.04	14 / 1155
kidney	100%	579.62	89 / 89	1%	0.02	6 / 901
intestine	100%	1128.14	965 / 966	1%	0.02	4 / 527
prostate	100%	1159.83	245 / 245	1%	0.01	3 / 502
pancreas	100%	921.41	327 / 328	1%	0.04	1 / 178
uterus	100%	744.38	170 / 170	0%	0.01	1 / 459
esophagus	100%	684.18	1439 / 1445	1%	0.01	1 / 183
ovary	100%	822.64	180 / 180	0%	0	0 / 430
blood vessel	100%	763.84	1333 / 1335	0%	0	0 / 0
thymus	100%	1283.00	652 / 653	0%	0	0 / 605
adipose	100%	714.59	1202 / 1204	0%	0	0 / 0
skin	99%	691.69	1784 / 1809	0%	0.01	2 / 472
spleen	98%	546.62	237 / 241	0%	0	0 / 0
liver	98%	642.51	222 / 226	0%	0	0 / 406
adrenal gland	98%	486.57	253 / 258	0%	0	0 / 230
muscle	88%	266.38	704 / 803	0%	0	0 / 0
heart	87%	317.38	745 / 861	0%	0	0 / 0
brain	68%	286.05	1787 / 2642	0%	0.00	1 / 705
peripheral blood	35%	109.78	327 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1