Insufficient scRNA-seq data for expression of PDF at single-cell level.
Insufficient scRNA-seq data for expression of PDF at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 363.97 | 180 / 180 | 99% | 3.77 | 424 / 430 |
esophagus | 100% | 479.33 | 1445 / 1445 | 96% | 2.93 | 175 / 183 |
stomach | 100% | 399.59 | 359 / 359 | 80% | 3.57 | 230 / 286 |
intestine | 100% | 437.67 | 966 / 966 | 59% | 3.47 | 311 / 527 |
kidney | 100% | 1115.30 | 89 / 89 | 31% | 0.84 | 277 / 901 |
bladder | 100% | 458.71 | 21 / 21 | 30% | 1.29 | 151 / 504 |
skin | 100% | 736.50 | 1809 / 1809 | 19% | 0.28 | 88 / 472 |
uterus | 100% | 452.48 | 170 / 170 | 18% | 0.30 | 82 / 459 |
lung | 99% | 428.57 | 571 / 578 | 19% | 0.57 | 219 / 1155 |
liver | 100% | 1025.80 | 226 / 226 | 17% | 0.26 | 71 / 406 |
thymus | 100% | 563.88 | 653 / 653 | 17% | 0.32 | 101 / 605 |
prostate | 100% | 465.00 | 245 / 245 | 12% | 0.16 | 59 / 502 |
brain | 98% | 376.76 | 2600 / 2642 | 12% | 0.18 | 85 / 705 |
breast | 100% | 518.87 | 459 / 459 | 8% | 0.13 | 95 / 1118 |
pancreas | 100% | 429.65 | 328 / 328 | 8% | 0.10 | 14 / 178 |
adrenal gland | 100% | 729.24 | 258 / 258 | 4% | 0.05 | 10 / 230 |
adipose | 100% | 487.28 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 580.57 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 479.34 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 355.62 | 1330 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 285.52 | 828 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 342.98 | 751 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 0.76 | 12 / 29 |
eye | 0% | 0 | 0 / 0 | 15% | 0.20 | 12 / 80 |
tonsil | 0% | 0 | 0 / 0 | 13% | 0.21 | 6 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006412 | Biological process | translation |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0031365 | Biological process | N-terminal protein amino acid modification |
GO_0018206 | Biological process | peptidyl-methionine modification |
GO_0043686 | Biological process | co-translational protein modification |
GO_0005739 | Cellular component | mitochondrion |
GO_0042586 | Molecular function | peptide deformylase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | |
Protein name | Peptide deformylase, mitochondrial (EC 3.5.1.88) (Polypeptide deformylase) |
Synonyms | PDF1A |
Description | FUNCTION: Removes the formyl group from the N-terminal Met of newly synthesized proteins. . |
Accessions | Q9HBH1 ENST00000288022.2 |