Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 12 studies | 61% ± 25% | |
GABAergic neuron | 11 studies | 55% ± 25% | |
oligodendrocyte precursor cell | 11 studies | 42% ± 17% | |
microglial cell | 11 studies | 52% ± 17% | |
astrocyte | 8 studies | 32% ± 15% | |
retinal ganglion cell | 7 studies | 45% ± 20% | |
T cell | 6 studies | 29% ± 6% | |
neuron | 5 studies | 48% ± 20% | |
epithelial cell | 5 studies | 25% ± 8% | |
amacrine cell | 5 studies | 32% ± 13% | |
interneuron | 5 studies | 67% ± 23% | |
macrophage | 4 studies | 31% ± 15% | |
endothelial cell | 4 studies | 34% ± 16% | |
fibroblast | 4 studies | 24% ± 13% | |
oligodendrocyte | 4 studies | 32% ± 16% | |
CD4-positive, alpha-beta T cell | 3 studies | 31% ± 4% | |
CD8-positive, alpha-beta T cell | 3 studies | 24% ± 4% | |
mesothelial cell | 3 studies | 29% ± 7% | |
GABAergic amacrine cell | 3 studies | 35% ± 14% | |
OFF-bipolar cell | 3 studies | 29% ± 8% | |
ON-bipolar cell | 3 studies | 30% ± 6% | |
glycinergic amacrine cell | 3 studies | 27% ± 8% | |
type I pneumocyte | 3 studies | 19% ± 3% | |
lymphocyte | 3 studies | 43% ± 12% | |
basal cell | 3 studies | 34% ± 17% | |
leukocyte | 3 studies | 55% ± 9% | |
granule cell | 3 studies | 59% ± 13% | |
dendritic cell | 3 studies | 25% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1536.27 | 245 / 245 | 100% | 5.72 | 502 / 502 |
ovary | 100% | 2175.04 | 180 / 180 | 100% | 6.53 | 429 / 430 |
esophagus | 99% | 1015.48 | 1436 / 1445 | 100% | 7.26 | 183 / 183 |
thymus | 100% | 1885.29 | 653 / 653 | 99% | 9.19 | 600 / 605 |
brain | 99% | 3554.13 | 2621 / 2642 | 100% | 7.33 | 703 / 705 |
pancreas | 99% | 769.84 | 324 / 328 | 98% | 5.89 | 175 / 178 |
uterus | 100% | 1159.01 | 170 / 170 | 95% | 4.32 | 435 / 459 |
bladder | 100% | 1409.86 | 21 / 21 | 94% | 3.70 | 475 / 504 |
breast | 97% | 1307.08 | 445 / 459 | 97% | 5.65 | 1086 / 1118 |
lung | 97% | 778.15 | 560 / 578 | 97% | 4.53 | 1120 / 1155 |
kidney | 100% | 1192.69 | 89 / 89 | 93% | 3.91 | 840 / 901 |
stomach | 98% | 770.07 | 351 / 359 | 95% | 4.13 | 272 / 286 |
intestine | 90% | 832.81 | 871 / 966 | 97% | 4.05 | 513 / 527 |
adrenal gland | 89% | 577.81 | 230 / 258 | 81% | 4.92 | 187 / 230 |
skin | 100% | 1496.96 | 1804 / 1809 | 65% | 2.38 | 309 / 472 |
spleen | 100% | 1154.62 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 3.29 | 44 / 45 |
adipose | 97% | 1169.68 | 1168 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 94% | 717.93 | 1250 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 3.34 | 26 / 29 |
peripheral blood | 58% | 440.60 | 542 / 929 | 0% | 0 | 0 / 0 |
liver | 2% | 7.39 | 5 / 226 | 32% | 1.61 | 131 / 406 |
heart | 32% | 164.14 | 272 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 28% | 0.63 | 22 / 80 |
muscle | 3% | 13.09 | 24 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0016020 | Cellular component | membrane |
GO_0005575 | Cellular component | cellular_component |
GO_0003674 | Molecular function | molecular_function |
Gene name | PCNX2 |
Protein name | Pecanex-like protein 2 (Pecanex homolog protein 2) Pecanex-like protein Pecanex 2 |
Synonyms | PCNXL2 KIAA0435 |
Description | FUNCTION: May play a role in tumorigenesis of colorectal carcinomas with high microsatellite instability (MSI-H). . |
Accessions | ENST00000517808.1 ENST00000486012.5 ENST00000475463.6 ENST00000490102.6 H0YBD1 H0YBD6 A6NKB5 H0YB15 H0YAR6 ENST00000484347.5 E7EVZ6 H0YAV6 H0YBF4 ENST00000518351.2 ENST00000344698.6 [A6NKB5-3] ENST00000258229.14 [A6NKB5-1] H0YB30 ENST00000488780.6 ENST00000462233.5 |