Insufficient scRNA-seq data for expression of PCDHGB5 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGB5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 231.49 | 650 / 653 | 86% | 6.45 | 523 / 605 |
prostate | 96% | 129.19 | 236 / 245 | 83% | 4.82 | 415 / 502 |
ovary | 100% | 367.96 | 180 / 180 | 74% | 5.55 | 317 / 430 |
adrenal gland | 95% | 181.59 | 244 / 258 | 71% | 6.20 | 163 / 230 |
breast | 100% | 200.81 | 459 / 459 | 61% | 3.59 | 677 / 1118 |
pancreas | 95% | 130.44 | 313 / 328 | 62% | 3.06 | 110 / 178 |
brain | 97% | 181.40 | 2566 / 2642 | 53% | 7.89 | 373 / 705 |
kidney | 96% | 119.84 | 85 / 89 | 52% | 2.90 | 468 / 901 |
lung | 99% | 209.66 | 574 / 578 | 47% | 2.58 | 540 / 1155 |
skin | 100% | 476.88 | 1809 / 1809 | 46% | 3.72 | 215 / 472 |
esophagus | 98% | 156.60 | 1420 / 1445 | 40% | 1.99 | 74 / 183 |
bladder | 95% | 176.81 | 20 / 21 | 31% | 1.31 | 154 / 504 |
intestine | 94% | 128.98 | 908 / 966 | 25% | 1.08 | 131 / 527 |
uterus | 100% | 265.54 | 170 / 170 | 15% | 0.86 | 71 / 459 |
stomach | 72% | 80.84 | 260 / 359 | 35% | 1.39 | 100 / 286 |
blood vessel | 100% | 377.03 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 165.28 | 1196 / 1204 | 0% | 0 | 0 / 0 |
muscle | 96% | 116.95 | 769 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 136.40 | 803 / 861 | 0% | 0 | 0 / 0 |
liver | 58% | 56.93 | 131 / 226 | 32% | 1.21 | 129 / 406 |
eye | 0% | 0 | 0 / 0 | 85% | 8.70 | 68 / 80 |
spleen | 66% | 47.51 | 159 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 20% | 1.01 | 9 / 45 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.38 | 4 / 29 |
peripheral blood | 11% | 10.63 | 100 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007399 | Biological process | nervous system development |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0008150 | Biological process | biological_process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | PCDHGB5 |
Protein name | Protocadherin gamma-B5 (PCDH-gamma-B5) |
Synonyms | |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | ENST00000617380.2 [Q9Y5G0-1] Q9Y5G0 ENST00000621169.1 [Q9Y5G0-2] |