Insufficient scRNA-seq data for expression of PCDHGB4 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGB4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 99% | 110.33 | 649 / 653 | 53% | 1.46 | 323 / 605 |
ovary | 100% | 190.15 | 180 / 180 | 45% | 1.62 | 194 / 430 |
adrenal gland | 97% | 88.27 | 249 / 258 | 41% | 1.89 | 94 / 230 |
prostate | 99% | 69.18 | 242 / 245 | 29% | 0.73 | 146 / 502 |
breast | 100% | 89.35 | 457 / 459 | 19% | 0.73 | 218 / 1118 |
skin | 100% | 247.95 | 1806 / 1809 | 16% | 0.56 | 76 / 472 |
lung | 99% | 93.53 | 574 / 578 | 15% | 0.43 | 170 / 1155 |
kidney | 96% | 57.65 | 85 / 89 | 18% | 0.73 | 158 / 901 |
bladder | 100% | 90.95 | 21 / 21 | 9% | 0.21 | 45 / 504 |
esophagus | 99% | 81.17 | 1434 / 1445 | 7% | 0.33 | 13 / 183 |
uterus | 100% | 161.35 | 170 / 170 | 6% | 0.17 | 29 / 459 |
brain | 92% | 62.90 | 2430 / 2642 | 9% | 1.97 | 61 / 705 |
blood vessel | 100% | 140.24 | 1333 / 1335 | 0% | 0 | 0 / 0 |
intestine | 94% | 78.05 | 911 / 966 | 5% | 0.11 | 24 / 527 |
adipose | 99% | 74.13 | 1190 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 91% | 43.37 | 297 / 328 | 8% | 0.30 | 14 / 178 |
heart | 97% | 93.62 | 838 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 60.42 | 766 / 803 | 0% | 0 | 0 / 0 |
liver | 76% | 48.31 | 172 / 226 | 16% | 0.42 | 66 / 406 |
spleen | 86% | 33.55 | 208 / 241 | 0% | 0 | 0 / 0 |
stomach | 64% | 37.40 | 228 / 359 | 9% | 0.25 | 26 / 286 |
eye | 0% | 0 | 0 / 0 | 49% | 1.62 | 39 / 80 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.29 | 4 / 45 |
peripheral blood | 9% | 4.06 | 81 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHGB4 |
Protein name | Protocadherin gamma-B4 (PCDH-gamma-B4) (Cadherin-20) (Fibroblast cadherin-2) |
Synonyms | CDH20 FIB2 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | Q9UN71 ENST00000615384.1 [Q9UN71-2] ENST00000519479.2 [Q9UN71-1] |