Insufficient scRNA-seq data for expression of PCDHGB3 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGB3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 99% | 62.84 | 646 / 653 | 32% | 0.76 | 193 / 605 |
brain | 89% | 46.40 | 2364 / 2642 | 40% | 2.06 | 284 / 705 |
prostate | 98% | 47.10 | 240 / 245 | 31% | 0.64 | 156 / 502 |
esophagus | 95% | 70.25 | 1369 / 1445 | 29% | 0.61 | 53 / 183 |
adrenal gland | 89% | 40.84 | 229 / 258 | 28% | 0.75 | 65 / 230 |
ovary | 100% | 143.04 | 180 / 180 | 15% | 0.32 | 64 / 430 |
breast | 98% | 67.53 | 451 / 459 | 16% | 0.37 | 184 / 1118 |
lung | 98% | 61.39 | 565 / 578 | 13% | 0.30 | 152 / 1155 |
skin | 98% | 98.10 | 1778 / 1809 | 10% | 0.16 | 45 / 472 |
pancreas | 95% | 48.22 | 310 / 328 | 12% | 0.25 | 21 / 178 |
uterus | 100% | 126.20 | 170 / 170 | 5% | 0.13 | 23 / 459 |
kidney | 81% | 26.06 | 72 / 89 | 23% | 0.51 | 203 / 901 |
bladder | 95% | 75.76 | 20 / 21 | 5% | 0.09 | 26 / 504 |
intestine | 94% | 71.49 | 909 / 966 | 6% | 0.09 | 30 / 527 |
blood vessel | 100% | 116.92 | 1330 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 57.61 | 1190 / 1204 | 0% | 0 | 0 / 0 |
heart | 94% | 88.78 | 808 / 861 | 0% | 0 | 0 / 0 |
muscle | 90% | 40.27 | 719 / 803 | 0% | 0 | 0 / 0 |
stomach | 65% | 31.73 | 234 / 359 | 14% | 0.26 | 39 / 286 |
spleen | 78% | 26.93 | 187 / 241 | 0% | 0 | 0 / 0 |
liver | 31% | 6.94 | 71 / 226 | 6% | 0.14 | 25 / 406 |
lymph node | 0% | 0 | 0 / 0 | 21% | 0.58 | 6 / 29 |
peripheral blood | 17% | 11.10 | 156 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 14% | 0.37 | 11 / 80 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.05 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHGB3 |
Protein name | Protocadherin gamma-B3 (PCDH-gamma-B3) Alternative protein PCDHGB3 |
Synonyms | |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | L0R6M0 ENST00000576222.2 [Q9Y5G1-1] ENST00000618934.1 [Q9Y5G1-2] Q9Y5G1 |