Insufficient scRNA-seq data for expression of PCDHGB1 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGB1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 99% | 112.24 | 2606 / 2642 | 55% | 5.96 | 386 / 705 |
| prostate | 77% | 23.68 | 188 / 245 | 62% | 2.12 | 311 / 502 |
| ovary | 99% | 72.84 | 178 / 180 | 39% | 1.58 | 168 / 430 |
| lung | 98% | 51.28 | 567 / 578 | 33% | 0.94 | 378 / 1155 |
| breast | 90% | 45.17 | 415 / 459 | 38% | 1.27 | 423 / 1118 |
| esophagus | 84% | 32.32 | 1211 / 1445 | 39% | 1.62 | 71 / 183 |
| thymus | 95% | 38.93 | 621 / 653 | 26% | 0.60 | 157 / 605 |
| adrenal gland | 91% | 46.01 | 236 / 258 | 26% | 0.72 | 59 / 230 |
| skin | 86% | 27.74 | 1556 / 1809 | 29% | 0.90 | 137 / 472 |
| uterus | 98% | 65.44 | 167 / 170 | 15% | 0.46 | 69 / 459 |
| bladder | 90% | 31.62 | 19 / 21 | 19% | 0.40 | 95 / 504 |
| kidney | 72% | 18.47 | 64 / 89 | 29% | 1.11 | 261 / 901 |
| pancreas | 81% | 23.91 | 265 / 328 | 20% | 0.56 | 35 / 178 |
| blood vessel | 97% | 48.35 | 1299 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 89% | 25.43 | 1076 / 1204 | 0% | 0 | 0 / 0 |
| heart | 89% | 32.81 | 763 / 861 | 0% | 0 | 0 / 0 |
| intestine | 68% | 21.93 | 660 / 966 | 9% | 0.26 | 47 / 527 |
| stomach | 39% | 11.78 | 141 / 359 | 12% | 0.27 | 35 / 286 |
| muscle | 44% | 7.60 | 350 / 803 | 0% | 0 | 0 / 0 |
| spleen | 26% | 4.40 | 63 / 241 | 0% | 0 | 0 / 0 |
| liver | 17% | 2.66 | 38 / 226 | 7% | 0.15 | 28 / 406 |
| eye | 0% | 0 | 0 / 0 | 15% | 0.38 | 12 / 80 |
| peripheral blood | 5% | 1.47 | 51 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 4% | 0.08 | 2 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO_0007155 | Biological process | cell adhesion |
| GO_0007399 | Biological process | nervous system development |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0030426 | Cellular component | growth cone |
| GO_0005509 | Molecular function | calcium ion binding |
| Gene name | PCDHGB1 |
| Protein name | Protocadherin gamma-B1 (PCDH-gamma-B1) Protocadherin gamma subfamily B, 1 |
| Synonyms | |
| Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
| Accessions | Q9Y5G3 ENST00000523390.2 [Q9Y5G3-1] ENST00000611598.1 [Q9Y5G3-2] Q3SY74 |