PCDHGA3 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of PCDHGA3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	256.45	2618 / 2642	60%	4.56	425 / 705
thymus	98%	88.49	640 / 653	39%	1.14	236 / 605
adrenal gland	91%	78.41	236 / 258	36%	1.53	82 / 230
prostate	93%	72.47	229 / 245	28%	0.86	141 / 502
breast	99%	121.84	456 / 459	14%	0.24	153 / 1118
skin	91%	66.75	1647 / 1809	22%	0.97	102 / 472
ovary	100%	268.61	180 / 180	10%	0.36	45 / 430
lung	98%	107.00	569 / 578	8%	0.22	90 / 1155
bladder	100%	93.57	21 / 21	4%	0.06	20 / 504
uterus	100%	165.25	170 / 170	2%	0.11	11 / 459
blood vessel	100%	156.24	1330 / 1335	0%	0	0 / 0
adipose	98%	86.64	1185 / 1204	0%	0	0 / 0
heart	98%	209.36	844 / 861	0%	0	0 / 0
pancreas	79%	45.71	258 / 328	11%	0.24	19 / 178
muscle	87%	53.40	699 / 803	0%	0	0 / 0
kidney	69%	37.51	61 / 89	14%	0.61	123 / 901
esophagus	74%	54.91	1076 / 1445	5%	0.14	9 / 183
intestine	74%	56.35	711 / 966	2%	0.03	9 / 527
stomach	46%	39.73	166 / 359	4%	0.08	12 / 286
liver	38%	13.69	85 / 226	13%	0.35	52 / 406
spleen	39%	16.31	94 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	38%	1.98	30 / 80
lymph node	0%	0	0 / 0	3%	0.04	1 / 29
peripheral blood	0%	0.13	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007156	Biological process	homophilic cell adhesion via plasma membrane adhesion molecules
GO_0007155	Biological process	cell adhesion
GO_0060989	Biological process	lipid tube assembly involved in organelle fusion
GO_0008333	Biological process	endosome to lysosome transport
GO_0007399	Biological process	nervous system development
GO_0005886	Cellular component	plasma membrane
GO_0005509	Molecular function	calcium ion binding

Gene name	PCDHGA3
Protein name	Protocadherin gamma-A3 (PCDH-gamma-A3) Alternative protein PCDHGA3 Protocadherin gamma subfamily A, 3 PCDHGA3 protein
Synonyms
Description	FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Accessions	A4FUP4 A0A087WYH2 A4IF53 ENST00000612467.1 Q9Y5H0 A4FUP3 L8EAH5 ENST00000619750.1 [Q9Y5H0-2] ENST00000253812.8 [Q9Y5H0-1]

PCDHGA3 report