Insufficient scRNA-seq data for expression of PCDHGA12 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGA12 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 98% | 206.16 | 641 / 653 | 67% | 3.52 | 407 / 605 |
skin | 97% | 597.60 | 1763 / 1809 | 65% | 16.37 | 306 / 472 |
brain | 97% | 395.67 | 2550 / 2642 | 65% | 9.84 | 457 / 705 |
breast | 99% | 190.57 | 453 / 459 | 63% | 1.50 | 699 / 1118 |
adrenal gland | 100% | 465.82 | 257 / 258 | 51% | 3.29 | 118 / 230 |
esophagus | 92% | 208.13 | 1335 / 1445 | 55% | 1.20 | 101 / 183 |
ovary | 99% | 207.24 | 178 / 180 | 45% | 1.38 | 194 / 430 |
lung | 100% | 361.33 | 576 / 578 | 42% | 0.98 | 481 / 1155 |
bladder | 95% | 142.33 | 20 / 21 | 16% | 0.27 | 81 / 504 |
prostate | 83% | 107.33 | 203 / 245 | 28% | 0.47 | 141 / 502 |
uterus | 100% | 265.87 | 170 / 170 | 7% | 0.27 | 33 / 459 |
intestine | 81% | 113.96 | 778 / 966 | 26% | 0.58 | 136 / 527 |
pancreas | 35% | 31.50 | 116 / 328 | 67% | 1.52 | 120 / 178 |
adipose | 100% | 309.86 | 1198 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 302.52 | 1321 / 1335 | 0% | 0 | 0 / 0 |
stomach | 56% | 92.55 | 201 / 359 | 42% | 1.25 | 121 / 286 |
heart | 98% | 299.48 | 842 / 861 | 0% | 0 | 0 / 0 |
kidney | 56% | 71.15 | 50 / 89 | 40% | 1.19 | 361 / 901 |
muscle | 65% | 78.55 | 518 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 60% | 9.16 | 48 / 80 |
spleen | 57% | 55.26 | 137 / 241 | 0% | 0 | 0 / 0 |
liver | 25% | 21.69 | 57 / 226 | 18% | 0.54 | 72 / 406 |
lymph node | 0% | 0 | 0 / 0 | 34% | 0.87 | 10 / 29 |
tonsil | 0% | 0 | 0 / 0 | 16% | 0.24 | 7 / 45 |
peripheral blood | 11% | 19.19 | 104 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005911 | Cellular component | cell-cell junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHGA12 |
Protein name | Protocadherin gamma-A12 (PCDH-gamma-A12) (Cadherin-21) (Fibroblast cadherin-3) |
Synonyms | KIAA0588 FIB3 CDH21 UNQ371/PRO707 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | ENST00000613314.1 [O60330-2] ENST00000252085.4 [O60330-1] O60330 |