Insufficient scRNA-seq data for expression of PCDHGA11 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGA11 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 116.07 | 652 / 653 | 59% | 2.28 | 358 / 605 |
adrenal gland | 100% | 109.55 | 258 / 258 | 45% | 1.93 | 104 / 230 |
skin | 100% | 409.26 | 1809 / 1809 | 42% | 3.62 | 196 / 472 |
brain | 96% | 136.39 | 2547 / 2642 | 35% | 4.47 | 245 / 705 |
esophagus | 100% | 113.06 | 1444 / 1445 | 23% | 0.54 | 42 / 183 |
ovary | 100% | 155.18 | 180 / 180 | 19% | 0.68 | 83 / 430 |
prostate | 99% | 86.83 | 243 / 245 | 16% | 0.38 | 81 / 502 |
breast | 100% | 101.10 | 458 / 459 | 13% | 0.36 | 142 / 1118 |
intestine | 98% | 107.79 | 943 / 966 | 12% | 0.18 | 63 / 527 |
kidney | 89% | 56.70 | 79 / 89 | 21% | 0.74 | 187 / 901 |
lung | 99% | 94.05 | 573 / 578 | 10% | 0.32 | 118 / 1155 |
bladder | 100% | 83.81 | 21 / 21 | 4% | 0.14 | 21 / 504 |
uterus | 100% | 128.67 | 170 / 170 | 4% | 0.25 | 19 / 459 |
adipose | 100% | 110.25 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 139.01 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 143.38 | 847 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 86.56 | 767 / 803 | 0% | 0 | 0 / 0 |
spleen | 93% | 52.18 | 224 / 241 | 0% | 0 | 0 / 0 |
stomach | 76% | 52.22 | 274 / 359 | 16% | 0.33 | 47 / 286 |
pancreas | 83% | 48.20 | 271 / 328 | 8% | 0.20 | 14 / 178 |
liver | 74% | 34.76 | 167 / 226 | 7% | 0.15 | 29 / 406 |
eye | 0% | 0 | 0 / 0 | 51% | 3.02 | 41 / 80 |
lymph node | 0% | 0 | 0 / 0 | 31% | 0.58 | 9 / 29 |
peripheral blood | 19% | 20.40 | 172 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHGA11 |
Protein name | Protocadherin gamma-A11 (PCDH-gamma-A11) |
Synonyms | |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | ENST00000622044.1 [Q9Y5H2-2] Q9Y5H2 ENST00000518882.2 [Q9Y5H2-3] ENST00000398587.7 [Q9Y5H2-1] |