Insufficient scRNA-seq data for expression of PCDHGA1 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHGA1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 99.41 | 2600 / 2642 | 69% | 4.50 | 484 / 705 |
prostate | 91% | 43.24 | 222 / 245 | 48% | 1.18 | 242 / 502 |
esophagus | 94% | 59.90 | 1359 / 1445 | 39% | 1.02 | 71 / 183 |
ovary | 99% | 85.36 | 179 / 180 | 26% | 0.54 | 113 / 430 |
skin | 86% | 38.99 | 1549 / 1809 | 37% | 1.05 | 173 / 472 |
lung | 94% | 47.98 | 546 / 578 | 26% | 0.57 | 296 / 1155 |
bladder | 95% | 75.95 | 20 / 21 | 25% | 0.46 | 124 / 504 |
breast | 92% | 39.56 | 420 / 459 | 25% | 0.70 | 282 / 1118 |
uterus | 100% | 112.19 | 170 / 170 | 15% | 0.28 | 70 / 459 |
intestine | 90% | 59.11 | 869 / 966 | 20% | 0.39 | 107 / 527 |
pancreas | 90% | 43.96 | 295 / 328 | 19% | 0.38 | 33 / 178 |
adrenal gland | 65% | 19.01 | 168 / 258 | 41% | 1.17 | 95 / 230 |
kidney | 76% | 23.37 | 68 / 89 | 29% | 0.72 | 265 / 901 |
thymus | 95% | 41.28 | 623 / 653 | 10% | 0.18 | 58 / 605 |
blood vessel | 100% | 110.48 | 1330 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 73.03 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 110.45 | 839 / 861 | 0% | 0 | 0 / 0 |
adipose | 91% | 35.47 | 1100 / 1204 | 0% | 0 | 0 / 0 |
stomach | 44% | 20.26 | 157 / 359 | 18% | 0.35 | 51 / 286 |
spleen | 46% | 10.85 | 112 / 241 | 0% | 0 | 0 / 0 |
liver | 10% | 2.07 | 22 / 226 | 12% | 0.24 | 49 / 406 |
peripheral blood | 4% | 1.18 | 39 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.02 | 1 / 45 |
eye | 0% | 0 | 0 / 0 | 1% | 0.01 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHGA1 |
Protein name | Protocadherin gamma-A1 (PCDH-gamma-A1) |
Synonyms | |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | Q9Y5H4 ENST00000517417.3 [Q9Y5H4-1] ENST00000378105.4 [Q9Y5H4-2] |