Insufficient scRNA-seq data for expression of PCDHB8 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHB8 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 94% | 33.57 | 2489 / 2642 | 72% | 4.90 | 507 / 705 |
ovary | 98% | 55.11 | 177 / 180 | 57% | 3.65 | 247 / 430 |
lung | 99% | 56.91 | 572 / 578 | 51% | 2.49 | 592 / 1155 |
breast | 98% | 59.73 | 451 / 459 | 43% | 2.45 | 476 / 1118 |
esophagus | 77% | 26.02 | 1118 / 1445 | 63% | 4.24 | 115 / 183 |
bladder | 95% | 31.81 | 20 / 21 | 38% | 1.81 | 189 / 504 |
pancreas | 83% | 31.63 | 272 / 328 | 47% | 1.64 | 84 / 178 |
uterus | 99% | 90.66 | 169 / 170 | 28% | 1.53 | 130 / 459 |
prostate | 78% | 21.55 | 190 / 245 | 48% | 3.56 | 241 / 502 |
kidney | 74% | 19.71 | 66 / 89 | 47% | 1.72 | 421 / 901 |
adrenal gland | 68% | 18.94 | 176 / 258 | 50% | 2.20 | 115 / 230 |
intestine | 82% | 30.37 | 791 / 966 | 24% | 1.27 | 129 / 527 |
thymus | 92% | 31.21 | 603 / 653 | 12% | 0.27 | 71 / 605 |
blood vessel | 99% | 80.28 | 1328 / 1335 | 0% | 0 | 0 / 0 |
skin | 68% | 18.78 | 1226 / 1809 | 30% | 1.67 | 141 / 472 |
adipose | 97% | 45.39 | 1168 / 1204 | 0% | 0 | 0 / 0 |
heart | 95% | 39.01 | 816 / 861 | 0% | 0 | 0 / 0 |
stomach | 56% | 14.86 | 200 / 359 | 33% | 1.63 | 93 / 286 |
spleen | 60% | 11.65 | 144 / 241 | 0% | 0 | 0 / 0 |
muscle | 43% | 7.05 | 345 / 803 | 0% | 0 | 0 / 0 |
liver | 9% | 0.98 | 20 / 226 | 17% | 0.98 | 67 / 406 |
tonsil | 0% | 0 | 0 / 0 | 11% | 0.43 | 5 / 45 |
eye | 0% | 0 | 0 / 0 | 5% | 0.08 | 4 / 80 |
peripheral blood | 0% | 0.04 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
GO_0042802 | Molecular function | identical protein binding |
Gene name | PCDHB8 |
Protein name | Protocadherin beta-8 (PCDH-beta-8) (Protocadherin-3I) |
Synonyms | PCDH3I |
Description | FUNCTION: Calcium-dependent cell-adhesion protein involved in cells self-recognition and non-self discrimination. Thereby, it is involved in the establishment and maintenance of specific neuronal connections in the brain. . |
Accessions | ENST00000708365.1 Q9UN66 ENST00000239444.4 |