Insufficient scRNA-seq data for expression of PCDHB13 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHB13 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 164.44 | 242 / 245 | 91% | 3.49 | 457 / 502 |
adrenal gland | 100% | 252.14 | 258 / 258 | 89% | 3.34 | 205 / 230 |
esophagus | 99% | 176.62 | 1435 / 1445 | 90% | 4.57 | 164 / 183 |
pancreas | 100% | 229.02 | 327 / 328 | 88% | 3.16 | 156 / 178 |
brain | 96% | 117.30 | 2537 / 2642 | 88% | 2.62 | 617 / 705 |
ovary | 100% | 285.43 | 180 / 180 | 80% | 3.47 | 346 / 430 |
kidney | 98% | 118.74 | 87 / 89 | 81% | 3.39 | 726 / 901 |
breast | 100% | 263.39 | 459 / 459 | 72% | 2.65 | 808 / 1118 |
lung | 99% | 193.71 | 575 / 578 | 72% | 2.71 | 833 / 1155 |
thymus | 100% | 199.43 | 651 / 653 | 69% | 2.27 | 417 / 605 |
bladder | 100% | 178.29 | 21 / 21 | 63% | 2.02 | 319 / 504 |
intestine | 95% | 169.25 | 920 / 966 | 57% | 1.92 | 300 / 527 |
uterus | 99% | 323.92 | 169 / 170 | 49% | 1.71 | 226 / 459 |
stomach | 76% | 90.65 | 273 / 359 | 67% | 2.56 | 192 / 286 |
skin | 81% | 194.30 | 1458 / 1809 | 60% | 2.36 | 285 / 472 |
adipose | 100% | 236.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 276.87 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 173.63 | 853 / 861 | 0% | 0 | 0 / 0 |
spleen | 97% | 111.76 | 234 / 241 | 0% | 0 | 0 / 0 |
liver | 40% | 22.92 | 91 / 226 | 34% | 1.45 | 137 / 406 |
muscle | 71% | 52.78 | 573 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 47% | 1.39 | 21 / 45 |
eye | 0% | 0 | 0 / 0 | 34% | 0.66 | 27 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007416 | Biological process | synapse assembly |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0097381 | Cellular component | photoreceptor disc membrane |
GO_0032391 | Cellular component | photoreceptor connecting cilium |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHB13 |
Protein name | Protocadherin beta-13 (PCDH-beta-13) |
Synonyms | UNQ332/PRO531 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | Q9Y5F0 ENST00000708383.1 ENST00000341948.6 |