Insufficient scRNA-seq data for expression of PCDHB1 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHB1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 98% | 26.64 | 87 / 89 | 6% | 0.10 | 51 / 901 |
pancreas | 95% | 24.02 | 310 / 328 | 2% | 0.03 | 3 / 178 |
brain | 80% | 14.56 | 2123 / 2642 | 7% | 0.13 | 50 / 705 |
intestine | 70% | 21.05 | 680 / 966 | 0% | 0 | 0 / 527 |
lung | 63% | 11.31 | 367 / 578 | 1% | 0.02 | 13 / 1155 |
stomach | 53% | 4.45 | 190 / 359 | 0% | 0.00 | 1 / 286 |
breast | 39% | 4.39 | 178 / 459 | 1% | 0.01 | 9 / 1118 |
uterus | 32% | 5.44 | 55 / 170 | 1% | 0.02 | 6 / 459 |
prostate | 32% | 2.31 | 78 / 245 | 0% | 0 | 0 / 502 |
ovary | 21% | 1.23 | 38 / 180 | 10% | 0.16 | 41 / 430 |
adrenal gland | 25% | 2.41 | 65 / 258 | 4% | 0.12 | 10 / 230 |
esophagus | 26% | 1.96 | 370 / 1445 | 2% | 0.03 | 3 / 183 |
thymus | 24% | 1.48 | 154 / 653 | 0% | 0 | 0 / 605 |
adipose | 20% | 1.29 | 246 / 1204 | 0% | 0 | 0 / 0 |
bladder | 19% | 0.95 | 4 / 21 | 1% | 0.01 | 3 / 504 |
blood vessel | 8% | 0.45 | 104 / 1335 | 0% | 0 | 0 / 0 |
muscle | 7% | 0.50 | 57 / 803 | 0% | 0 | 0 / 0 |
heart | 7% | 0.35 | 58 / 861 | 0% | 0 | 0 / 0 |
liver | 6% | 0.28 | 14 / 226 | 0% | 0.00 | 1 / 406 |
spleen | 6% | 0.39 | 15 / 241 | 0% | 0 | 0 / 0 |
skin | 5% | 0.28 | 82 / 1809 | 0% | 0.01 | 2 / 472 |
peripheral blood | 3% | 0.18 | 31 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHB1 |
Protein name | Protocadherin beta-1 (PCDH-beta-1) |
Synonyms | |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | Q9Y5F3 ENST00000708334.1 ENST00000306549.6 |