Insufficient scRNA-seq data for expression of PCDHAC1 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHAC1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 93% | 35.19 | 608 / 653 | 39% | 0.88 | 237 / 605 |
pancreas | 99% | 57.44 | 326 / 328 | 17% | 0.32 | 30 / 178 |
adrenal gland | 66% | 15.04 | 171 / 258 | 46% | 1.75 | 106 / 230 |
lung | 83% | 53.85 | 480 / 578 | 28% | 0.90 | 320 / 1155 |
brain | 86% | 38.00 | 2285 / 2642 | 18% | 0.31 | 128 / 705 |
breast | 78% | 17.04 | 357 / 459 | 7% | 0.17 | 80 / 1118 |
uterus | 73% | 15.12 | 124 / 170 | 11% | 0.30 | 51 / 459 |
adipose | 75% | 16.16 | 897 / 1204 | 0% | 0 | 0 / 0 |
kidney | 69% | 13.81 | 61 / 89 | 5% | 0.10 | 48 / 901 |
esophagus | 57% | 44.57 | 824 / 1445 | 13% | 0.27 | 24 / 183 |
intestine | 62% | 11.48 | 602 / 966 | 7% | 0.12 | 35 / 527 |
ovary | 48% | 6.07 | 87 / 180 | 10% | 0.18 | 44 / 430 |
stomach | 39% | 5.49 | 139 / 359 | 4% | 0.10 | 11 / 286 |
bladder | 38% | 4.48 | 8 / 21 | 3% | 0.09 | 14 / 504 |
liver | 36% | 7.85 | 82 / 226 | 4% | 0.09 | 16 / 406 |
spleen | 26% | 3.29 | 63 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 23% | 3.48 | 305 / 1335 | 0% | 0 | 0 / 0 |
skin | 16% | 1.81 | 282 / 1809 | 5% | 0.08 | 22 / 472 |
prostate | 16% | 1.86 | 38 / 245 | 2% | 0.03 | 12 / 502 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.19 | 3 / 29 |
heart | 9% | 1.07 | 75 / 861 | 0% | 0 | 0 / 0 |
muscle | 2% | 0.23 | 19 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 0.26 | 19 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHAC1 |
Protein name | HCG1982192, isoform CRA_y (Protocadherin alpha subfamily C, 1) Protocadherin alpha-C1 (PCDH-alpha-C1) |
Synonyms | hCG_1982192 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | ENST00000253807.3 [Q9H158-1] Q9H158 ENST00000708335.1 [Q9H158-2] ENST00000708336.1 [Q9H158-1] ENST00000409700.4 [Q9H158-2] B2RNA7 |