Insufficient scRNA-seq data for expression of PCDHA5 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHA5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 96% | 59.62 | 2536 / 2642 | 8% | 0.22 | 59 / 705 |
pancreas | 91% | 19.33 | 300 / 328 | 5% | 0.25 | 9 / 178 |
ovary | 89% | 17.14 | 161 / 180 | 6% | 0.08 | 25 / 430 |
uterus | 90% | 18.82 | 153 / 170 | 3% | 0.05 | 15 / 459 |
kidney | 82% | 12.51 | 73 / 89 | 6% | 0.12 | 55 / 901 |
breast | 79% | 16.83 | 363 / 459 | 8% | 0.16 | 95 / 1118 |
lung | 83% | 13.76 | 478 / 578 | 4% | 0.07 | 48 / 1155 |
intestine | 78% | 10.60 | 751 / 966 | 2% | 0.05 | 13 / 527 |
thymus | 69% | 7.96 | 453 / 653 | 0% | 0 | 0 / 605 |
adipose | 58% | 6.43 | 696 / 1204 | 0% | 0 | 0 / 0 |
prostate | 53% | 5.67 | 129 / 245 | 3% | 0.05 | 14 / 502 |
esophagus | 39% | 3.59 | 563 / 1445 | 7% | 0.12 | 13 / 183 |
stomach | 43% | 4.19 | 153 / 359 | 3% | 0.06 | 9 / 286 |
bladder | 43% | 3.86 | 9 / 21 | 3% | 0.04 | 14 / 504 |
skin | 37% | 3.51 | 672 / 1809 | 6% | 0.10 | 30 / 472 |
blood vessel | 43% | 4.04 | 570 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 28% | 3.48 | 72 / 258 | 7% | 0.29 | 16 / 230 |
spleen | 24% | 1.96 | 59 / 241 | 0% | 0 | 0 / 0 |
heart | 16% | 1.25 | 138 / 861 | 0% | 0 | 0 / 0 |
liver | 4% | 0.23 | 9 / 226 | 1% | 0.02 | 4 / 406 |
peripheral blood | 5% | 0.46 | 45 / 929 | 0% | 0 | 0 / 0 |
muscle | 3% | 0.25 | 28 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHA5 |
Protein name | Protocadherin alpha-5 (PCDH-alpha-5) |
Synonyms | CNRS6 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | ENST00000529859.2 [Q9Y5H7-1] ENST00000708299.1 [Q9Y5H7-1] ENST00000708298.1 [Q9Y5H7-2] ENST00000614258.1 [Q9Y5H7-2] ENST00000529619.5 [Q9Y5H7-3] Q9Y5H7 ENST00000708300.1 [Q9Y5H7-3] |