Insufficient scRNA-seq data for expression of PCDHA13 at single-cell level.
Insufficient scRNA-seq data for expression of PCDHA13 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 87% | 27.85 | 2294 / 2642 | 10% | 0.24 | 69 / 705 |
pancreas | 90% | 16.48 | 294 / 328 | 1% | 0.01 | 2 / 178 |
thymus | 82% | 11.57 | 538 / 653 | 4% | 0.05 | 24 / 605 |
breast | 79% | 9.34 | 361 / 459 | 7% | 0.14 | 76 / 1118 |
uterus | 78% | 10.78 | 133 / 170 | 1% | 0.02 | 5 / 459 |
adipose | 77% | 9.35 | 924 / 1204 | 0% | 0 | 0 / 0 |
lung | 70% | 9.08 | 404 / 578 | 4% | 0.08 | 48 / 1155 |
adrenal gland | 55% | 4.88 | 141 / 258 | 17% | 0.49 | 39 / 230 |
kidney | 60% | 5.12 | 53 / 89 | 3% | 0.05 | 24 / 901 |
esophagus | 52% | 9.60 | 758 / 1445 | 5% | 0.10 | 9 / 183 |
intestine | 52% | 4.00 | 501 / 966 | 2% | 0.04 | 8 / 527 |
ovary | 49% | 3.51 | 89 / 180 | 1% | 0.01 | 3 / 430 |
bladder | 43% | 3.24 | 9 / 21 | 1% | 0.02 | 6 / 504 |
prostate | 29% | 1.86 | 71 / 245 | 9% | 0.20 | 47 / 502 |
liver | 32% | 4.41 | 73 / 226 | 3% | 0.04 | 12 / 406 |
stomach | 30% | 1.95 | 106 / 359 | 2% | 0.04 | 6 / 286 |
spleen | 27% | 1.71 | 66 / 241 | 0% | 0 | 0 / 0 |
skin | 17% | 1.01 | 307 / 1809 | 6% | 0.08 | 27 / 472 |
blood vessel | 16% | 1.04 | 220 / 1335 | 0% | 0 | 0 / 0 |
heart | 10% | 0.59 | 89 / 861 | 0% | 0 | 0 / 0 |
muscle | 6% | 0.32 | 49 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 0.04 | 3 / 80 |
peripheral blood | 2% | 0.12 | 19 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDHA13 |
Protein name | Protocadherin alpha-13 (PCDH-alpha-13) Protocadherin alpha 13 |
Synonyms | CNRS5 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain. |
Accessions | Q9Y5I0 ENST00000708327.1 [Q9Y5I0-2] ENST00000289272.3 [Q9Y5I0-1] ENST00000708325.1 [Q9Y5I0-1] C9JA99 ENST00000617769.1 [Q9Y5I0-2] ENST00000409494.5 |