PCDH11Y report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	9 studies	32% ± 13%	Explore
oligodendrocyte precursor cell	9 studies	28% ± 11%	Explore
GABAergic neuron	4 studies	38% ± 17%	Explore
retina horizontal cell	4 studies	28% ± 9%	Explore
interneuron	3 studies	27% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	29% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	60%	221.68	1587 / 2642	12%	0.26	88 / 705
prostate	63%	27.32	155 / 245	1%	0.11	4 / 502
blood vessel	63%	102.97	839 / 1335	0%	0	0 / 0
bladder	52%	60.52	11 / 21	0%	0	0 / 504
intestine	35%	26.70	341 / 966	0%	0	0 / 527
adrenal gland	10%	11.57	27 / 258	23%	1.88	52 / 230
stomach	32%	12.90	114 / 359	0%	0	0 / 286
kidney	19%	5.74	17 / 89	0%	0.00	1 / 901
breast	18%	6.63	81 / 459	0%	0.00	1 / 1118
thymus	13%	4.17	85 / 653	0%	0	0 / 605
lung	12%	4.15	72 / 578	0%	0.00	1 / 1155
esophagus	7%	3.56	104 / 1445	0%	0	0 / 183
adipose	7%	2.18	84 / 1204	0%	0	0 / 0
ovary	7%	1.86	12 / 180	0%	0	0 / 430
heart	3%	0.83	22 / 861	0%	0	0 / 0
skin	2%	0.74	43 / 1809	0%	0	0 / 472
uterus	1%	0.19	1 / 170	0%	0	0 / 459
pancreas	0%	0	0 / 328	1%	0.02	1 / 178
spleen	0%	0.08	1 / 241	0%	0	0 / 0
peripheral blood	0%	0.04	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
liver	0%	0	0 / 226	0%	0	0 / 406
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1