PCDH11X report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	11 studies	47% ± 17%	Explore
oligodendrocyte precursor cell	11 studies	37% ± 13%	Explore
GABAergic neuron	8 studies	46% ± 20%	Explore
interneuron	6 studies	35% ± 13%	Explore
neuron	5 studies	29% ± 12%	Explore
GABAergic interneuron	3 studies	45% ± 2%	Explore
retina horizontal cell	3 studies	23% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	11 studies	36% ± 19%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	75%	361.13	1988 / 2642	60%	2.09	423 / 705
ovary	97%	358.69	174 / 180	3%	0.05	11 / 430
blood vessel	84%	330.18	1127 / 1335	0%	0	0 / 0
uterus	45%	65.84	77 / 170	4%	0.10	19 / 459
breast	35%	26.99	160 / 459	4%	0.25	44 / 1118
thymus	33%	25.06	213 / 653	1%	0.02	4 / 605
adrenal gland	3%	1.50	7 / 258	30%	1.53	69 / 230
bladder	29%	24.24	6 / 21	1%	0.02	5 / 504
lung	18%	10.58	105 / 578	1%	0.01	6 / 1155
skin	12%	6.66	226 / 1809	0%	0.00	2 / 472
prostate	12%	8.58	30 / 245	0%	0.00	1 / 502
intestine	11%	14.49	103 / 966	0%	0.01	2 / 527
esophagus	2%	1.31	32 / 1445	1%	0.02	2 / 183
adipose	2%	1.22	30 / 1204	0%	0	0 / 0
spleen	1%	0.49	3 / 241	0%	0	0 / 0
kidney	1%	0.62	1 / 89	0%	0.01	1 / 901
stomach	1%	0.28	2 / 359	0%	0.01	1 / 286
pancreas	0%	0	0 / 328	1%	0.01	1 / 178
heart	0%	0.14	3 / 861	0%	0	0 / 0
muscle	0%	0.09	2 / 803	0%	0	0 / 0
peripheral blood	0%	0.05	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
liver	0%	0	0 / 226	0%	0	0 / 406
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1