Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 9 studies | 28% ± 9% | |
astrocyte | 8 studies | 31% ± 12% | |
glutamatergic neuron | 7 studies | 45% ± 22% | |
GABAergic neuron | 5 studies | 44% ± 19% | |
oligodendrocyte precursor cell | 5 studies | 28% ± 9% | |
interneuron | 4 studies | 48% ± 20% | |
neuron | 3 studies | 26% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 42% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 90% | 4338.45 | 2366 / 2642 | 99% | 40.20 | 695 / 705 |
prostate | 95% | 2383.33 | 233 / 245 | 84% | 7.34 | 421 / 502 |
adrenal gland | 61% | 554.95 | 158 / 258 | 54% | 7.50 | 124 / 230 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.60 | 1 / 1 |
blood vessel | 93% | 3558.02 | 1240 / 1335 | 0% | 0 | 0 / 0 |
kidney | 29% | 359.35 | 26 / 89 | 49% | 7.23 | 439 / 901 |
bladder | 43% | 332.24 | 9 / 21 | 5% | 0.45 | 26 / 504 |
ovary | 34% | 274.18 | 62 / 180 | 13% | 1.05 | 57 / 430 |
uterus | 21% | 152.39 | 35 / 170 | 14% | 5.01 | 64 / 459 |
esophagus | 15% | 241.04 | 217 / 1445 | 4% | 0.34 | 8 / 183 |
heart | 13% | 91.82 | 110 / 861 | 0% | 0 | 0 / 0 |
stomach | 11% | 67.99 | 38 / 359 | 1% | 0.27 | 4 / 286 |
breast | 1% | 6.16 | 5 / 459 | 9% | 3.90 | 104 / 1118 |
thymus | 8% | 43.28 | 49 / 653 | 1% | 0.08 | 7 / 605 |
pancreas | 0% | 0 | 0 / 328 | 8% | 0.55 | 14 / 178 |
intestine | 6% | 33.96 | 57 / 966 | 1% | 0.10 | 6 / 527 |
eye | 0% | 0 | 0 / 0 | 6% | 0.18 | 5 / 80 |
lung | 2% | 11.87 | 11 / 578 | 4% | 0.31 | 48 / 1155 |
skin | 0% | 1.11 | 3 / 1809 | 4% | 0.30 | 21 / 472 |
adipose | 2% | 14.73 | 28 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.07 | 1 / 45 |
liver | 0% | 0 | 0 / 226 | 0% | 0.02 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | PCDH10 |
Protein name | Protocadherin-10 Protocadherin 10 isoform A Protocadherin 10 Protocadherin 10 isoform B |
Synonyms | KIAA1400 |
Description | FUNCTION: Potential calcium-dependent cell-adhesion protein. |
Accessions | Q14DV7 ENST00000618019.1 [Q9P2E7-2] Q9P2E7 X5D999 X5D2R8 ENST00000264360.7 [Q9P2E7-1] |