PAPLN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	12 studies	36% ± 19%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	5163.17	652 / 653	97%	31.15	586 / 605
kidney	100%	6575.43	89 / 89	90%	33.28	815 / 901
lung	99%	2680.99	571 / 578	83%	8.89	960 / 1155
esophagus	96%	2504.14	1384 / 1445	78%	9.33	143 / 183
uterus	100%	4905.62	170 / 170	70%	7.60	322 / 459
breast	97%	2391.29	446 / 459	63%	4.77	704 / 1118
prostate	99%	2610.07	242 / 245	61%	3.67	308 / 502
skin	84%	2296.53	1528 / 1809	69%	5.58	324 / 472
ovary	98%	3250.79	177 / 180	47%	3.70	202 / 430
brain	66%	1108.98	1734 / 2642	75%	8.54	526 / 705
intestine	97%	2460.29	938 / 966	40%	2.83	213 / 527
bladder	86%	883.67	18 / 21	49%	4.19	245 / 504
stomach	68%	1857.22	245 / 359	55%	4.61	156 / 286
pancreas	25%	247.17	81 / 328	84%	8.85	149 / 178
spleen	100%	5394.09	241 / 241	0%	0	0 / 0
adipose	98%	2787.18	1175 / 1204	0%	0	0 / 0
adrenal gland	86%	1126.98	223 / 258	6%	0.78	13 / 230
tonsil	0%	0	0 / 0	91%	16.62	41 / 45
lymph node	0%	0	0 / 0	90%	9.13	26 / 29
eye	0%	0	0 / 0	88%	8.90	70 / 80
blood vessel	61%	786.03	809 / 1335	0%	0	0 / 0
heart	48%	614.30	415 / 861	0%	0	0 / 0
liver	12%	103.17	27 / 226	36%	5.52	147 / 406
peripheral blood	21%	240.94	198 / 929	0%	0	0 / 0
muscle	9%	75.69	73 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1