Insufficient scRNA-seq data for expression of PABPC1L at single-cell level.
Insufficient scRNA-seq data for expression of PABPC1L at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 99% | 1862.00 | 168 / 170 | 95% | 23.65 | 437 / 459 |
ovary | 100% | 3989.11 | 180 / 180 | 94% | 28.97 | 404 / 430 |
thymus | 100% | 8148.47 | 653 / 653 | 93% | 19.40 | 560 / 605 |
esophagus | 96% | 1308.88 | 1386 / 1445 | 96% | 19.18 | 175 / 183 |
bladder | 100% | 2124.43 | 21 / 21 | 91% | 28.45 | 461 / 504 |
pancreas | 100% | 4649.32 | 328 / 328 | 88% | 16.62 | 157 / 178 |
lung | 100% | 2988.20 | 576 / 578 | 84% | 20.99 | 973 / 1155 |
skin | 97% | 1880.47 | 1761 / 1809 | 86% | 21.57 | 407 / 472 |
intestine | 98% | 1790.74 | 948 / 966 | 83% | 17.26 | 440 / 527 |
liver | 100% | 4798.77 | 226 / 226 | 80% | 15.49 | 324 / 406 |
breast | 97% | 3038.31 | 445 / 459 | 81% | 15.76 | 911 / 1118 |
stomach | 99% | 2358.45 | 355 / 359 | 78% | 18.07 | 224 / 286 |
prostate | 100% | 4636.11 | 244 / 245 | 68% | 9.17 | 342 / 502 |
kidney | 100% | 5547.61 | 89 / 89 | 64% | 13.57 | 576 / 901 |
adrenal gland | 100% | 2182.73 | 257 / 258 | 38% | 4.13 | 87 / 230 |
brain | 60% | 614.95 | 1582 / 2642 | 70% | 12.20 | 490 / 705 |
spleen | 100% | 3673.24 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.30 | 1 / 1 |
peripheral blood | 97% | 2402.75 | 902 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 19.23 | 27 / 29 |
blood vessel | 93% | 1462.60 | 1239 / 1335 | 0% | 0 | 0 / 0 |
adipose | 92% | 1125.42 | 1111 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 69% | 9.42 | 31 / 45 |
heart | 56% | 490.37 | 479 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 44% | 5.15 | 35 / 80 |
muscle | 6% | 37.14 | 48 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070062 | Cellular component | extracellular exosome |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005829 | Cellular component | cytosol |
GO_0010494 | Cellular component | cytoplasmic stress granule |
GO_0005634 | Cellular component | nucleus |
GO_0008143 | Molecular function | poly(A) binding |
GO_0003730 | Molecular function | mRNA 3'-UTR binding |
GO_0008266 | Molecular function | poly(U) RNA binding |
Gene name | PABPC1L |
Protein name | Polyadenylate-binding protein (PABP) Poly(A) binding protein cytoplasmic 1 like Polyadenylate-binding protein 1-like |
Synonyms | C20orf119 |
Description | FUNCTION: Binds the poly(A) tail of mRNA. . |
Accessions | Q4VXT5 H0Y386 A0A6Q8JFT6 Q4VXT8 ENST00000217075.7 ENST00000537323.5 [Q4VXU2-2] ENST00000674318.1 ENST00000217073.7 A0A6I8PLA1 ENST00000217074.9 ENST00000255136.8 [Q4VXU2-1] ENST00000372822.2 A0A6I8PL98 A0A6I8PIK9 ENST00000490798.6 ENST00000372826.6 ENST00000674244.1 ENST00000476056.6 A0A6Q8JFV4 Q4VXU2 A0A6I8PS38 |