OPA3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	4 studies	24% ± 7%	Explore
GABAergic neuron	3 studies	25% ± 8%	Explore
endothelial cell	3 studies	20% ± 4%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	1109.87	459 / 459	100%	11.06	1118 / 1118
esophagus	100%	1495.95	1445 / 1445	100%	11.40	183 / 183
intestine	100%	1500.04	966 / 966	100%	9.51	527 / 527
prostate	100%	1340.51	245 / 245	100%	10.34	502 / 502
skin	100%	1523.36	1809 / 1809	100%	15.51	472 / 472
thymus	100%	1489.44	653 / 653	100%	12.50	605 / 605
bladder	100%	1272.81	21 / 21	100%	10.44	503 / 504
uterus	100%	1265.95	170 / 170	100%	12.79	458 / 459
kidney	100%	2044.71	89 / 89	100%	13.89	899 / 901
liver	100%	1236.16	226 / 226	100%	9.26	405 / 406
brain	100%	1164.95	2634 / 2642	100%	8.80	705 / 705
stomach	100%	1210.12	359 / 359	100%	9.56	285 / 286
pancreas	99%	805.53	326 / 328	100%	10.52	178 / 178
lung	100%	1349.47	576 / 578	100%	10.38	1151 / 1155
adrenal gland	100%	2283.13	258 / 258	99%	13.48	228 / 230
ovary	100%	1042.34	180 / 180	99%	7.67	426 / 430
adipose	100%	1203.19	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	15.92	80 / 80
lymph node	0%	0	0 / 0	100%	14.92	29 / 29
muscle	100%	2070.97	803 / 803	0%	0	0 / 0
spleen	100%	1823.49	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.36	45 / 45
ureter	0%	0	0 / 0	100%	9.79	1 / 1
blood vessel	100%	974.87	1334 / 1335	0%	0	0 / 0
heart	99%	2205.75	855 / 861	0%	0	0 / 0
peripheral blood	89%	1070.19	824 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0