I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 4 studies | 24% ± 6% | |
| epithelial cell | 3 studies | 23% ± 6% | |
| GABAergic neuron | 3 studies | 25% ± 5% | |
| glutamatergic neuron | 3 studies | 26% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| astrocyte | 4 studies | 24% ± 6% | |
| epithelial cell | 3 studies | 23% ± 6% | |
| GABAergic neuron | 3 studies | 25% ± 5% | |
| glutamatergic neuron | 3 studies | 26% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 4790.17 | 1445 / 1445 | 100% | 68.75 | 183 / 183 |
| intestine | 100% | 4053.78 | 966 / 966 | 100% | 38.63 | 527 / 527 |
| prostate | 100% | 4291.17 | 245 / 245 | 100% | 29.79 | 502 / 502 |
| stomach | 100% | 3245.26 | 359 / 359 | 100% | 41.01 | 286 / 286 |
| breast | 100% | 3784.59 | 459 / 459 | 100% | 35.84 | 1116 / 1118 |
| skin | 100% | 5493.25 | 1809 / 1809 | 100% | 39.21 | 471 / 472 |
| lung | 100% | 5078.86 | 578 / 578 | 100% | 35.63 | 1151 / 1155 |
| bladder | 100% | 3975.10 | 21 / 21 | 99% | 31.65 | 501 / 504 |
| uterus | 100% | 4266.82 | 170 / 170 | 99% | 44.38 | 456 / 459 |
| thymus | 100% | 4154.33 | 653 / 653 | 99% | 32.15 | 600 / 605 |
| ovary | 100% | 3329.59 | 180 / 180 | 98% | 24.55 | 423 / 430 |
| brain | 98% | 2402.31 | 2584 / 2642 | 100% | 34.87 | 703 / 705 |
| pancreas | 98% | 2000.61 | 323 / 328 | 99% | 23.90 | 176 / 178 |
| kidney | 100% | 2446.18 | 89 / 89 | 96% | 16.74 | 868 / 901 |
| adrenal gland | 100% | 4307.50 | 258 / 258 | 96% | 21.70 | 221 / 230 |
| liver | 100% | 1546.08 | 226 / 226 | 75% | 10.13 | 306 / 406 |
| adipose | 100% | 3720.03 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 46.67 | 29 / 29 |
| spleen | 100% | 4911.98 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 55.15 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 15.51 | 1 / 1 |
| blood vessel | 100% | 3746.98 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 2660.32 | 801 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 26.02 | 79 / 80 |
| heart | 98% | 2546.37 | 846 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 75% | 2968.05 | 697 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006913 | Biological process | nucleocytoplasmic transport |
| GO_0006405 | Biological process | RNA export from nucleus |
| GO_0051028 | Biological process | mRNA transport |
| GO_0006606 | Biological process | protein import into nucleus |
| GO_0044611 | Cellular component | nuclear pore inner ring |
| GO_0005829 | Cellular component | cytosol |
| GO_0005643 | Cellular component | nuclear pore |
| GO_0005635 | Cellular component | nuclear envelope |
| GO_0016020 | Cellular component | membrane |
| GO_0017056 | Molecular function | structural constituent of nuclear pore |
| Gene name | NUP188 |
| Protein name | NUP188 protein Nucleoporin NUP188 (hNup188) |
| Synonyms | KIAA0169 |
| Description | FUNCTION: Component of the nuclear pore complex (NPC), a complex required for the trafficking across the nuclear envelope (Probable). Required for proper protein transport into the nucleus . . |
| Accessions | Q9BS12 Q5SRE5 ENST00000372577.2 [Q5SRE5-1] |
