NNAT report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
neuron	6 studies	73% ± 22%	Explore
glutamatergic neuron	5 studies	47% ± 28%	Explore
endothelial cell	4 studies	29% ± 14%	Explore
interneuron	4 studies	58% ± 17%	Explore
Mueller cell	4 studies	24% ± 5%	Explore
GABAergic neuron	4 studies	43% ± 27%	Explore
connective tissue cell	3 studies	39% ± 27%	Explore
neural crest cell	3 studies	57% ± 16%	Explore
smooth muscle cell	3 studies	42% ± 8%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	7 studies	30% ± 11%	Explore
intestine	3 studies	21% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	94%	10593.51	2473 / 2642	95%	125.28	668 / 705
intestine	69%	2162.59	669 / 966	65%	7.78	345 / 527
bladder	52%	540.38	11 / 21	60%	73.37	301 / 504
breast	56%	1517.49	256 / 459	51%	4.35	574 / 1118
esophagus	20%	208.00	286 / 1445	84%	31.32	154 / 183
stomach	28%	729.05	102 / 359	72%	17.25	205 / 286
ureter	0%	0	0 / 0	100%	307.18	1 / 1
adrenal gland	10%	159.26	26 / 258	61%	44.24	141 / 230
pancreas	0%	0	0 / 328	63%	3.35	112 / 178
uterus	5%	42.50	9 / 170	57%	38.57	263 / 459
adipose	59%	1135.03	713 / 1204	0%	0	0 / 0
prostate	6%	46.00	14 / 245	50%	11.25	249 / 502
lung	1%	3.75	4 / 578	52%	8.69	596 / 1155
tonsil	0%	0	0 / 0	44%	1.86	20 / 45
ovary	0%	0	0 / 180	38%	2.98	163 / 430
muscle	28%	266.36	221 / 803	0%	0	0 / 0
kidney	0%	0	0 / 89	26%	1.25	231 / 901
lymph node	0%	0	0 / 0	24%	1.10	7 / 29
skin	4%	45.32	72 / 1809	18%	0.66	84 / 472
thymus	0%	12.27	2 / 653	19%	3.47	115 / 605
eye	0%	0	0 / 0	18%	1.75	14 / 80
liver	1%	6.74	2 / 226	6%	0.22	24 / 406
blood vessel	1%	19.33	19 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0