NIPSNAP3B report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	3 studies	19% ± 1%	Explore
glutamatergic neuron	3 studies	24% ± 2%	Explore
adipocyte	3 studies	21% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	913.48	258 / 258	99%	6.89	227 / 230
thymus	100%	469.25	653 / 653	98%	4.29	591 / 605
prostate	99%	348.38	243 / 245	96%	3.25	481 / 502
kidney	96%	255.31	85 / 89	83%	2.30	744 / 901
pancreas	94%	183.68	309 / 328	83%	1.92	147 / 178
ovary	100%	394.92	180 / 180	77%	1.80	330 / 430
breast	100%	624.31	459 / 459	71%	1.78	798 / 1118
brain	96%	332.00	2527 / 2642	71%	1.81	498 / 705
uterus	98%	370.77	167 / 170	58%	1.48	264 / 459
lung	95%	234.34	550 / 578	60%	1.34	690 / 1155
esophagus	76%	144.92	1097 / 1445	54%	1.24	98 / 183
bladder	86%	161.95	18 / 21	38%	0.75	194 / 504
stomach	84%	153.48	302 / 359	36%	0.69	103 / 286
intestine	83%	169.90	803 / 966	29%	0.53	152 / 527
skin	56%	81.04	1007 / 1809	45%	1.04	213 / 472
adipose	100%	765.39	1204 / 1204	0%	0	0 / 0
muscle	100%	1061.46	803 / 803	0%	0	0 / 0
blood vessel	100%	692.82	1333 / 1335	0%	0	0 / 0
spleen	100%	263.29	240 / 241	0%	0	0 / 0
heart	98%	776.21	843 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	49%	1.49	39 / 80
lymph node	0%	0	0 / 0	48%	1.58	14 / 29
tonsil	0%	0	0 / 0	47%	1.21	21 / 45
liver	9%	11.05	21 / 226	17%	0.30	67 / 406
peripheral blood	20%	67.36	183 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1